Tableau information
Concept source: d1ff5a2 amino acid (a.a.) range (ARG105)(VAL174)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG105) (THR109) E1
(GLU111) (SER116) E2
(LYS129) (ALA135) E3
(ALA145) (ILE150) E4
(GLN153) (HIS159) H5
(MET162) (ASN166) E6
(GLY170) (VAL174) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 44.8° E2
E3 134.8° 161.6° E3
E4 -68.8° -55.5° 142.4° E4
H5 78.8° 34.3° -141.9° -54.9° H5
E6 106.3° 118.3° -43.9° 173.7° -121.0° E6
E7 -62.5° -32.7° 161.4° -25.5° 32.0° 148.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1q55a_ : (ASP103) (LEU174) [view usage] : i.20.1.1 |Ep-cadherin |Ep-cadherin |Ep-cadherin |Ep-cadherin |Mouse (Mus musculus) [TaxId: 10090]
d1l3wa2 : (ASP103) (LEU174) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1ff5a2 : (ARG105) (VAL174) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d1egja_ : (ILE338) (ALA401) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors |Human (Homo sapiens) [TaxId: 9606]
d2jlpc_ : (GLN57) (GLY144) [view usage] : b.1.8.0 |Immunoglobulin-like beta-sandwich |Cu,Zn superoxide dismutase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2o72a2 : (LYS105) (VAL174) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d3q2na2 : (ASP103) (VAL174) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d2d9ca_ : (GLN10) (ASN85) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gafb3 : (ARG208) (GLU283) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Type-1 interleukin-1 receptor |Human (Homo sapiens) [TaxId: 9606]
d1edha2 : (ARG105) (VAL174) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1, i.20