Protein Concepts Dictionary

Tableau information

Concept source:  d1r3ub_  amino acid (a.a.) range (SER79)(GLU135)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER79)   (ILE85) E1
	   (ILE85)   (ILE90) E2
	   (ASP96)  (ASP102) E3
	  (ASP102)  (SER106) E4
	  (GLY107)  (GLY119) H5
	  (SER124)  (ILE130) E6
	  (ILE130)  (GLU135) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      -78.4°   E2                                        
E3       96.7°  140.4°   E3                                 
E4      143.5° -121.8°   85.3°   E4                          
H5      -63.9°  -47.7°  159.0° -105.4°   H5                   
E6       91.2°  118.5°  -21.9° -102.1°  152.2°   E6            
E7      150.1° -128.9°   70.4°  -17.3° -122.3°   85.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i0ia_ :    (SER89)  (GLU145)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine PRTase |Trypanosoma cruzi [TaxId: 5693]
 d1p18a_ :    (SER89)  (GLU145)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine PRTase |Trypanosoma cruzi [TaxId: 5693]
 d2ehja_ :   (GLU109)  (ALA162)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1a95b_ :    (ASN67)  (PRO116)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine-guanine PRTase (XPRTase) |Escherichia coli [TaxId: 562]
 d3h83a_ :    (THR77)  (THR133)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d1r3ub_ :    (SER79)  (GLU135)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine PRTase (HGPRTase) |Thermoanaerobacter tengcongensis [TaxId: 119072]
 d1a97b_ :    (ASN67)  (PRO116)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine-guanine PRTase (XPRTase) |Escherichia coli [TaxId: 562]
 d1i14a_ :    (SER89)  (GLU145)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine PRTase |Trypanosoma cruzi [TaxId: 5693]
 d3hvua_ :    (THR77)  (THR133)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d1i13a_ :    (SER89)  (GLU145)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine PRTase |Trypanosoma cruzi [TaxId: 5693]
 d2geba_ :    (SER79)  (GLU135)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |automated matches |Thermoanaerobacter tengcongensis [TaxId: 119072]
 d4qyia_ :    (THR76)  (GLU132)   [view usage] : c.61.1.0 |PRTase-like |PRTase-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1yfzb_ :    (SER79)  (GLU135)   [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Xanthine-guanine PRTase (XPRTase) |Thermoanaerobacter tengcongensis [TaxId: 119072]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.61