Protein Concepts Dictionary

Tableau information

Concept source:  d4fk8a1  amino acid (a.a.) range (GLU51)(THR113)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU51)   (LEU57) E1
	   (GLY61)   (ALA67) E2
	   (ALA67)   (SER72) E3
	   (HIS78)   (GLN87) E4
	   (GLY89)   (LEU98) H5
	  (ASP102)  (GLY107) E6
	  (LYS108)  (THR113) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      148.8°   E2                                        
E3      110.1°   69.1°   E3                                 
E4      -63.2°   95.4°  137.1°   E4                          
H5       80.1°  -96.4°  -30.2° -124.4°   H5                   
E6      136.1°  -65.8° -109.2°   99.0° -135.1°   E6            
E7      135.4°  -28.2°  -97.2°   72.7° -122.9°   55.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4f7db1 :    (GLU51)  (THR113)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d1a8pa1 :    (GLN36)   (THR98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Azotobacter vinelandii [TaxId: 354]
 d4b4da1 :    (GLN37)   (THR99)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
 d4fk8a1 :    (GLU51)  (THR113)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d2bgia1 :    (GLU48)  (THR111)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d2qdxa1 :    (GLN36)   (THR98)   [view usage] : b.43.4.2 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Ferredoxin reductase FAD-binding domain-like |Ferredoxin reductase (flavodoxin reductase) N-terminal domain |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.43