Protein Concepts Dictionary

Tableau information

Concept source:  d3vl8a_  amino acid (a.a.) range (GLY128)(THR208)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY128)  (ILE133) E1
	  (LYS151)  (GLY155) E2
	  (THR161)  (ALA167) E3
	  (GLU172)  (GLY176) E4
	  (ASN179)  (GLY190) H5
	  (GLU194)  (THR199) E6
	  (ALA202)  (THR208) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      -52.1°   E2                                        
E3     -146.3°  161.5°   E3                                 
E4      -33.4°  -82.2°  116.0°   E4                          
H5      -47.9°  -63.2°  124.3°   70.5°   H5                   
E6      150.4°  101.9°  -61.1° -148.4°  139.4°   E6            
E7      115.3°   76.3°  -88.6°  146.7°   77.1°   62.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jema_ :   (ASN164)  (GLY246)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Bacillus licheniformis [TaxId: 1402]
 d2jena_ :   (ASN164)  (GLY246)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Bacillus licheniformis [TaxId: 1402]
 d2bw8a_ :   (GLY133)  (GLU210)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Rhodothermus marinus [TaxId: 29549]
 d1oa4a_ :   (GLY129)  (GLU206)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Streptomyces sp. 11ag8 [TaxId: 133452]
 d3vl9a_ :   (GLY128)  (THR208)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
 d1ks4a_ :   (GLY125)  (THR207)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Aspergillus niger [TaxId: 5061]
 d3vl8a_ :   (GLY128)  (THR208)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]
 d1h0ba_ :   (GLY133)  (GLU210)   [view usage] : b.29.1.11 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Xylanase/endoglucanase 11/12 |Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain |Rhodothermus marinus [TaxId: 29549]
 d3vlbb_ :   (GLY128)  (THR208)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Fungus (Aspergillus aculeatus) [TaxId: 5053]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29