Protein Concepts Dictionary

Tableau information

Concept source:  d4rnld_  amino acid (a.a.) range (VAL255)(SER338)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL255)  (ASP260) E1
	  (ARG265)  (THR271) E2
	  (PRO274)  (THR280) E3
	  (GLY301)  (GLN307) E4
	  (ARG315)  (PRO319) H5
	  (THR321)  (PRO325) E6
	  (GLY326)  (SER338) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      164.2°   E2                                        
E3       21.1°  145.1°   E3                                 
E4     -173.2°   16.3°  161.4°   E4                          
H5      -92.3° -100.2°  113.4°  -84.3°   H5                   
E6     -125.8°   50.2° -129.5°   47.6°  -74.7°   E6            
E7      -31.9°  163.5°  -48.3°  149.6°   71.1° -135.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1snzb_ :   (CYS257)  (SER340)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Human (Homo sapiens) [TaxId: 9606]
 d1ns0a_ :   (GLN257)  (GLU341)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d4rnlb_ :   (VAL255)  (SER338)   [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Streptomyces platensis [TaxId: 58346]
 d1nsxb_ :   (GLN257)  (THR338)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
 d4rnld_ :   (VAL255)  (SER338)   [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Streptomyces platensis [TaxId: 58346]
 d1l7ja_ :   (GLN257)  (THR338)   [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.30