Protein Concepts Dictionary

Tableau information

Concept source:  d1k2da2  amino acid (a.a.) range (HIS5)(ASN78)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS5)    (GLY9) E1
	   (ILE10)   (PRO16) E2
	   (ILE19)   (ASP27) E3
	   (LEU31)   (ASP37) E4
	   (LYS39)   (LEU45) E5
	   (LEU45)   (LEU51) H6
	   (GLN57)   (ASN78) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      -39.6°   E2                                        
E3     -160.5°  159.9°   E3                                 
E4        8.7°  -35.5°  163.2°   E4                          
E5      159.3°  126.6°  -34.9°  150.6°   E5                   
H6      -80.8° -117.0°   81.6°  -88.0°  116.3°   H6            
H7      -79.6°  -54.4°  114.3°  -81.6°  103.7°  109.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1iaoa2 :     (ASP3)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AD [TaxId: 10090]
 d4maya1 :     (ASP3)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1jl4a2 :     (HIS5)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AK [TaxId: 10090]
 d1lnua2 :     (ASP4)   (SER78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AB [TaxId: 10090]
 d1s9va2 :     (ASP4)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Human (Homo sapiens), HLA-DQ2 [TaxId: 9606]
 d1f3ja2 :     (ASP4)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
 d3o9wa1 :     (LYS6)   (MET88)   [view usage] : d.19.1.0 |MHC antigen-recognition domain |MHC antigen-recognition domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1es0a2 :     (ASP3)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-A(G7) [TaxId: 10090]
 d1jk8a2 :     (ASP4)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Human (Homo sapiens), HLA-DQ8 [TaxId: 9606]
 d3cupa1 :     (ASP3)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AB [TaxId: 10090]
 d1d9kc2 :     (ASP4)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AK [TaxId: 10090]
 d1k2da2 :     (HIS5)   (ASN78)   [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |Class II MHC alpha chain, N-terminal domain |Mouse (Mus musculus), I-AU [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.19