Protein Concepts Dictionary

Tableau information

Concept source:  d1kcrh1  amino acid (a.a.) range (ASN36)(ALA97)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN36)   (PRO42) E1
	   (LYS45)   (GLY50) E2
	   (GLY56)   (ASN61) E3
	   (ARG67)   (ASP73) E4
	   (GLN78)   (ASN84) E5
	   (THR87)   (THR93) H6
	   (THR93)   (ALA97) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      157.7°   E2                                        
E3      -31.0° -145.5°   E3                                 
E4      131.6°  -58.6°  155.3°   E4                          
E5      -52.1°  111.4°  -39.0°  161.5°   E5                   
H6      103.7°  -93.0°  118.7°  -37.1° -155.5°   H6            
E7      153.7°  -48.6°  135.2°  -47.8°  139.5°   60.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h8ob2 :   (TRP164)  (ALA228)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1bz7b1 :    (GLY33)  (GLY102)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]
 d4od3l1 :    (SER34)   (THR90)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4w6wb_ :   (ARG831)  (PRO899)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
 d4tvsa_ :    (ALA34)  (PHE101)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Vicugna pacos [TaxId: 30538]
 d1ua6h_ :    (SER35)   (ALA96)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.2 [TaxId: 10090]
 d1kxvc_ :    (SER35)   (SER98)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
 d1bzqk_ :   (GLY835)  (GLY899)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
 d1xfpa_ :    (GLY35)  (THR101)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Camelid IG heavy chain variable domain, VHh |Camel (Camelus dromedarius) [TaxId: 9838]
 d1h8oa2 :   (ASN166)  (ALA228)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1cf8h1 :    (ASN35)   (GLY97)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
 d4odhl1 :    (SER34)   (SER93)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ncwh1 :    (ASP32)   (LEU96)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
 d3g9ab_ :    (ALA35)   (ASP95)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
 d4n1hb_ :    (GLY35)  (THR100)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
 d4nc0b_ :    (ALA35)  (GLN101)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
 d3u6ra_ :    (GLN38)  (ASN106)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2p42b_ :    (GLY35)   (GLY99)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
 d2xxmb_ :    (ASN32)   (SER95)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Vicugna pacos [TaxId: 30538]
 d2gj6d1 :    (GLN30)   (THR93)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d4hemf_ :    (ALA33)   (GLY99)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Llama (Lama glama) [TaxId: 9844]
 d4unta_ :    (SER36)   (ASP97)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1