Protein Concepts Dictionary

Tableau information

Concept source:  d4m9pa2  amino acid (a.a.) range (ALA595)(ASP665)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA595)  (ALA601) E1
	  (GLY607)  (VAL613) E2
	  (LYS620)  (ASP625) E3
	  (GLY629)  (GLU639) E4
	  (GLU642)  (LEU648) E5
	  (ILE654)  (PHE659) H6
	  (PHE659)  (ASP665) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      161.7°   E2                                        
E3      -35.3°  156.7°   E3                                 
E4      154.3°  -14.5°  170.3°   E4                          
E5      -20.1°  166.8°  -36.2°  152.3°   E5                   
H6     -175.7°  -20.6°  145.3°  -25.6°  155.8°   H6            
E7      160.6°  -37.7°  127.9°  -43.3°  143.2°  -18.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2brqb_ :  (VAL2255) (SER2327)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j3sa1 :  (VAL2255) (SER2327)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2di9a1 :    (LYS48)  (MET120)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
 d3v8ob1 :   (GLY587)  (PRO660)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2brqa1 :  (VAL2255) (SER2327)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin a |Human (Homo sapiens) [TaxId: 9606]
 d2d7qa1 :    (SER29)  (GLY100)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin C |Human (Homo sapiens) [TaxId: 9606]
 d2nqca_ :  (VAL2502) (GLY2574)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bp3b_ :  (ALA1884) (GLY1954)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m9pa3 :   (ALA693)  (ALA765)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3v8oa1 :   (GLY587)  (PRO660)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m9pa2 :   (ALA595)  (ASP665)   [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2dj4a1 :    (VAL29)  (PRO103)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
 d2ee6a_ :    (VAL28)  (ALA100)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
 d1v05a_ :  (ASN2654) (PRO2725)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin C |Human (Homo sapiens) [TaxId: 9606]
 d4lptb_ :    (LEU18)   (PHE93)   [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
 d4lptd_ :    (ASP16)   (GLY97)   [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
 d1qfha2 :   (SER760)  (GLY838)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |F-actin cross-linking gelation factor (ABP-120) repeats |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d4lpte_ :    (LEU18)   (THR94)   [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Artificial gene [TaxId: 32630]
 d3cnka_ :  (SER2576) (PRO2647)   [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1