Protein Concepts Dictionary

Tableau information

Concept source:  d1sipa_  amino acid (a.a.) range (ASP30)(LEU93)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP30)   (GLY35) E1
	   (THR43)   (GLY49) E2
	   (GLY52)   (ASN61) E3
	   (VAL62)   (VAL66) E4
	   (LYS69)   (GLY73) E5
	   (GLY73)   (GLY78) E6
	   (ARG87)   (LEU93) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2     -103.2°   E2                                        
E3       91.2°  135.2°   E3                                 
E4       86.4°  -44.3°  -95.9°   E4                          
E5     -103.3°  105.9° -111.7°  150.2°   E5                   
E6      -58.3°  -74.0°  144.8°   98.9°  -64.8°   E6            
H7     -100.1°  -97.8°   37.4°  -60.6°  141.5° -152.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lzsa_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1sipa_ :    (ASP30)   (LEU93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Simian immunodeficiency virus (SIV) protease |Simian immunodeficiency virus, different strains [TaxId: 11723]
 d4npta_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3jw2a_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |automated matches |Human immunodeficiency virus type 1 (bru isolate) [TaxId: 11686]
 d3ucba_ :    (GLY40)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3lzua_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d2r38a_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1mrxa_ :    (GLY40)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3cywa_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d2i4va_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1siva_ :    (ASP30)   (LEU93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Simian immunodeficiency virus (SIV) protease |Simian immunodeficiency virus, different strains [TaxId: 11723]
 d3kt5a1 :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1mt7a_ :    (GLY40)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1bdla_ :    (ASP30)   (ILE93)   [view usage] : b.50.1.1 |Acid proteases |Acid proteases |Retroviral protease (retropepsin) |Human immunodeficiency virus type 1 protease |Human immunodeficiency virus type 1 [TaxId: 11676]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50