Protein Concepts Dictionary

Tableau information

Concept source:  d1j0wb_  amino acid (a.a.) range (CYS29)(GLU108)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (CYS29)   (TYR35) E1
	   (ILE38)   (ASP42) E2
	   (LEU50)   (PRO54) E3
	   (ARG59)   (THR65) E4
	   (PHE68)   (ARG74) E5
	   (GLY81)   (GLN86) E6
	   (GLY90)  (GLU108) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      146.6°   E2                                        
E3      -29.4° -175.9°   E3                                 
E4     -128.1°   59.8° -120.7°   E4                          
E5       63.4° -109.4°   70.4°  168.2°   E5                   
E6     -118.9°   59.7° -119.6°  -14.6°  165.0°   E6            
H7       31.2°  132.4°  -45.6° -158.9°   32.3°  147.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1irsa_ :   (ILE182)  (ARG265)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Insulin receptor substrate 1, IRS-1 |Human (Homo sapiens) [TaxId: 9606]
 d2v76b_ :    (GLY24)  (ALA106)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2cy4a1 :    (TRP72)  (ARG159)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |EPS8-like protein 1, EPS8L1 |Mouse (Mus musculus) [TaxId: 10090]
 d2nmba_ :   (GLY119)  (LEU199)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Numb |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1uefb_ :    (SER26)  (GLN104)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Docking protein 1, Dok1 |Mouse (Mus musculus) [TaxId: 10090]
 d1gg3a2 :   (ASP201)  (PHE277)   [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Erythroid membrane protein 4.1R |Human (Homo sapiens) [TaxId: 9606]
 d1p5tb_ :    (SER26)  (LYS106)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Docking protein 1, Dok1 |Mouse (Mus musculus) [TaxId: 10090]
 d2he7a3 :   (GLU310)  (LEU390)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1j0wa_ :    (CYS29)  (ALA105)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Downstream of tyrosine kinase 5, Dok-5 |Human (Homo sapiens) [TaxId: 9606]
 d1mk9f2 :   (ARG328)  (ILE398)   [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Talin |Chicken (Gallus gallus) [TaxId: 9031]
 d1pfja_ :    (ALA23)  (PHE103)   [view usage] : b.55.1.9 |PH domain-like barrel |PH domain-like |TFIIH domain |TFIIH basal transcription factor complex p62 subunit (BTF2-p62), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1j0wb_ :    (CYS29)  (GLU108)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Downstream of tyrosine kinase 5, Dok-5 |Human (Homo sapiens) [TaxId: 9606]
 d1p5ta_ :    (TYR27)  (ALA107)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Docking protein 1, Dok1 |Mouse (Mus musculus) [TaxId: 10090]
 d4ifsa_ :   (GLY350)  (LYS422)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tqza1 :    (PRO41)  (TRP129)   [view usage] : b.55.1.11 |PH domain-like barrel |PH domain-like |Necap1 N-terminal domain-like |Necap1 |Mouse (Mus musculus) [TaxId: 10090]
 d2cy5a_ :    (TRP72)  (ARG159)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.55