Protein Concepts Dictionary

Tableau information

Concept source:  d2x18c_  amino acid (a.a.) range (TYR26)(MET117)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR26)   (THR31) E1
	   (GLY33)   (LYS39) E2
	   (LEU51)   (ALA57) E3
	   (GLN60)   (THR64) E4
	   (ASN70)   (TRP79) E5
	   (THR81)   (ASP90) E6
	   (PRO92)  (MET117) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      165.7°   E2                                        
E3      -30.5°  162.0°   E3                                 
E4     -143.6°   46.4° -115.6°   E4                          
E5       54.8° -119.9°   76.5°  156.7°   E5                   
E6     -120.6°   58.5° -109.4°  -40.1°  158.3°   E6            
H7       32.7°  140.1°  -57.5° -169.7°   22.2°  146.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wg7a_ :    (SER39)  (ASN136)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Dedicator of cytokinesis protein 9, DOCK9 |Human (Homo sapiens) [TaxId: 9606]
 d2x18a_ :    (TYR26)  (GLU114)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3dxda_ :   (SER581)  (GLN667)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pmsa_ :   (LYS473)  (TYR563)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Son of sevenless-1 (sos-1) |Mouse (Mus musculus) [TaxId: 10090]
 d1p6sa_ :    (TYR26)  (LEU110)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-beta serine/threonine protein kinase (PKB/AKT) |Human (Homo sapiens) [TaxId: 9606]
 d2dyna_ :    (TRP34)  (GLY116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Dynamin |Human (Homo sapiens) [TaxId: 9606]
 d1fb8a_ :   (TRP181)  (ARG262)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH |Human (Homo sapiens) [TaxId: 9606]
 d4my6b_ :    (GLY31)  (VAL110)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2x18b_ :    (TYR26)  (ARG116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1unpa_ :    (TYR26)  (GLU117)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Rac-alpha serine/threonine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2bcja2 :   (TYR580)  (VAL661)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) |Cow (Bos taurus) [TaxId: 9913]
 d2iybc_ :    (GLY31)  (ASN112)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Enabled |Human (Homo sapiens) [TaxId: 9606]
 d1wgua_ :    (SER55)  (CYS130)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Amyloid beta A4 precursor protein-binding family B member 2, Apbb2 |Mouse (Mus musculus) [TaxId: 10090]
 d3dxcc_ :   (SER581)  (ARG665)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4my6a_ :    (GLY31)  (LEU111)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qqga2 :   (ILE182)  (ASP262)   [view usage] : b.55.1.2 |PH domain-like barrel |PH domain-like |Phosphotyrosine-binding domain (PTB) |Insulin receptor substrate 1, IRS-1 |Human (Homo sapiens) [TaxId: 9606]
 d2x18f_ :    (TYR26)  (GLN110)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2dn6a_ :    (TRP28)  (SER109)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2p8va_ :    (HIS36)  (GLU121)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d11a2 :   (GLU215)  (LYS296)   [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Radixin |Mouse (Mus musculus) [TaxId: 10090]
 d2iyba_ :    (GLY31)  (SER113)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Enabled |Human (Homo sapiens) [TaxId: 9606]
 d1y5oa1 :    (ILE15)  (ASP115)   [view usage] : b.55.1.9 |PH domain-like barrel |PH domain-like |TFIIH domain |RNA polymerase II transcription factor B 73 kDa, TFB1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2dhja_ :    (TYR39)  (SER116)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1u5fa1 :   (GLU136)  (LEU218)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src-associated adaptor protein Skap2 |Mouse (Mus musculus) [TaxId: 10090]
 d1ddwa_ :    (HIS30)  (ARG111)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Homer |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ddva_ :    (VAL32)  (ALA109)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Homer |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1x1fa1 :    (TRP38)  (TRP104)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Signal-transducing adaptor protein 1, STAP-1 |Human (Homo sapiens) [TaxId: 9606]
 d1dyna_ :    (TRP34)  (GLY116)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Dynamin |Human (Homo sapiens) [TaxId: 9606]
 d2cofa1 :    (TRP26)  (SER100)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |KIAA1914 |Human (Homo sapiens) [TaxId: 9606]
 d1e5wa2 :   (GLU215)  (LYS296)   [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Moesin |Human (Homo sapiens) [TaxId: 9606]
 d1evha_ :    (GLY31)  (ASN112)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Enabled |Mouse (Mus musculus) [TaxId: 10090]
 d1ni2a2 :   (ASP215)  (ARG295)   [view usage] : b.55.1.5 |PH domain-like barrel |PH domain-like |Third domain of FERM |Ezrin |Human (Homo sapiens) [TaxId: 9606]
 d2d9ya_ :    (TRP32)  (ALA108)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xkea1 :    (ASN34)  (ARG119)   [view usage] : b.55.1.3 |PH domain-like barrel |PH domain-like |Ran-binding domain |Ran-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
 d2crfa1 :    (GLY52)  (VAL143)   [view usage] : b.55.1.3 |PH domain-like barrel |PH domain-like |Ran-binding domain |Ran binding protein 3 |Human (Homo sapiens) [TaxId: 9606]
 d1faoa_ :   (TRP185)  (ILE261)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH |Human (Homo sapiens) [TaxId: 9606]
 d3dxea_ :   (SER581)  (SER666)   [view usage] : b.55.1.0 |PH domain-like barrel |PH domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2iybb_ :    (GLY31)  (LEU111)   [view usage] : b.55.1.4 |PH domain-like barrel |PH domain-like |Enabled/VASP homology 1 domain (EVH1 domain) |Enabled |Human (Homo sapiens) [TaxId: 9606]
 d1xx0a1 :   (LYS265)  (LYS350)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Pleckstrin |Human (Homo sapiens) [TaxId: 9606]
 d1wi1a_ :    (ARG28)  (GLY110)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Calcium-dependent activator protein for secretion, CAPS |Human (Homo sapiens) [TaxId: 9606]
 d2x18c_ :    (TYR26)  (MET117)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.55