Tableau information
Concept source: d1pk6c_ amino acid (a.a.) range (LEU116)(ASP195)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU116) (GLN120) E1
(GLY128) (VAL134) E2
(LEU137) (THR147) E3
(ASN149) (LEU154) E4
(VAL161) (HIS167) E5
(THR171) (LEU180) E6
(GLY186) (ASP195) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 40.0° E2
E3 -153.1° 166.6° E3
E4 20.0° -24.2° 165.2° E4
E5 -173.6° 146.3° -20.5° 164.8° E5
E6 19.2° -23.5° 169.3° -17.3° 166.7° E6
E7 -148.3° 154.5° -22.8° 167.1° -27.7° 150.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iuga4 : (PRO713) (GLY801) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Fungus (Aspergillus oryzae) [TaxId: 5062]
d2tnfa_ : (ASN34) (GLU135) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Mouse (Mus musculus) [TaxId: 10090]
d4f3ja_ : (LEU129) (VAL211) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pk6c_ : (LEU116) (ASP195) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Complement c1q globular head, C chain |Human (Homo sapiens) [TaxId: 9606]
d4ousa_ : (HIS1028) (ARG1111) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d2zjcb_ : (ASN34) (ARG138) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d4oulb_ : (LEU1023) (ARG1106) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pk6b_ : (ILE119) (ASP201) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Complement c1q globular head, B chain |Human (Homo sapiens) [TaxId: 9606]
d4nn0b_ : (LEU129) (VAL207) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4oulc_ : (LEU1023) (ARG1106) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wnvd_ : (ILE115) (ASP198) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Complement c1q globular head, A chain |Human (Homo sapiens) [TaxId: 9606]
d4oula_ : (LEU1023) (ARG1106) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pk6a_ : (ILE115) (ASP198) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Complement c1q globular head, A chain |Human (Homo sapiens) [TaxId: 9606]
d1o91a_ : (LEU638) (SER719) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Collagen NC1 trimerisation domain |Mouse (Mus musculus), isoform VIII [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.18, b.22