Tableau information
Concept source: d1bxua_ amino acid (a.a.) range (SER17)(VAL98)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER17) (ILE21) E1
(ASP25) (ASN31) E2
(PRO36) (VAL41) E3
(ASP59) (SER65) E4
(PHE70) (GLU76) E5
(GLY78) (CYS84) E6
(MET92) (VAL98) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 153.4° E2
E3 -47.7° 156.8° E3
E4 107.8° -59.5° 138.1° E4
E5 -54.6° 151.9° 12.1° -130.1° E5
E6 143.8° -12.3° 156.2° -65.0° 157.4° E6
E7 -15.1° 164.2° -39.0° 107.5° -43.0° 157.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vb5a_ : (LYS6) (TRP95) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Human (Homo sapiens) [TaxId: 9606]
d1yjma1 : (GLU52) (SER110) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Polynucleotide kinase 3'-phosphatase |Mouse (Mus musculus) [TaxId: 10090]
d2qpdb1 : (ASN93) (VAL165) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Thermus thermophilus, ba3 type [TaxId: 274]
d4bz1a_ : (GLU311) (HIS395) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus 4 [TaxId: 11070]
d1yfqa_ : (CYS61) (ASP128) [view usage] : b.69.4.2 |7-bladed beta-propeller |WD40 repeat-like |Cell cycle arrest protein BUB3 |Cell cycle arrest protein BUB3 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1id2a_ : (PRO34) (GLU106) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
d1bxua_ : (SER17) (VAL98) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |Synechocystis sp., pcc 7942 [TaxId: 1143]
d1aaca_ : (PRO33) (GLU105) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Amicyanin |Paracoccus denitrificans [TaxId: 266]
d2o1qa1 : (ALA58) (LEU117) [view usage] : b.82.1.21 |Double-stranded beta-helix |RmlC-like cupins |Acetylacetone-cleaving enzyme-like |Putative acetyl/propionyl-CoA carboxylase subunit alpha Mpe_A3659 |Rubrivivax gelatinosus [TaxId: 28068]
d1zx5a1 : (GLY238) (TYR296) [view usage] : b.82.1.3 |Double-stranded beta-helix |RmlC-like cupins |Type I phosphomannose isomerase |Putative mannosephosphate isomerase AF0035 |Archaeoglobus fulgidus [TaxId: 2234]
d2llna_ : (PRO52) (GLU126) [view usage] : b.6.1.2 |Cupredoxin-like |Cupredoxins |Periplasmic domain of cytochrome c oxidase subunit II |Cytochrome c oxidase |Thermus thermophilus, ba3 type [TaxId: 274]
d3acla_ : (GLY179) (GLU244) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1k4ra_ : (ALA317) (PHE393) [view usage] : i.17.1.1 |Virus envelope proteins |Virus envelope proteins |Virus envelope proteins |Virus envelope proteins |Dengue virus [TaxId: 12637]
d1lxma2 : (LYS183) (ALA246) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Hyaluronate lyase precatalytic domain |Streptococcus agalactiae [TaxId: 1311]
d1sfna_ : (ALA1181) (ASP1239) [view usage] : b.82.1.11 |Double-stranded beta-helix |RmlC-like cupins |YlbA-like |Hypothetical protein DR1152 |Deinococcus radiodurans [TaxId: 1299]
d1bvp12 : (GLY166) (VAL247) [view usage] : b.19.1.1 |Viral protein domain |Viral protein domain |Top domain of virus capsid protein |BTV vp7, central (top) domain |Bluetongue virus [TaxId: 40051]
d4hlta_ : (HIS56) (ARG121) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d4hlta_ : (GLY179) (GLU244) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d3amra_ : (ASN71) (ASN165) [view usage] : b.68.3.1 |6-bladed beta-propeller |Thermostable phytase (3-phytase) |Thermostable phytase (3-phytase) |automated matches |Bacillus subtilis [TaxId: 1423]
d2fo8a1 : (LEU14) (ASN110) [view usage] : b.1.26.1 |Immunoglobulin-like beta-sandwich |ICP-like |ICP-like |Chagasin |Trypanosoma cruzi [TaxId: 5693]
d4dp0x_ : (GLU18) (ASN99) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |automated matches |Populus nigra [TaxId: 3691]
d1lwra_ : (SER4) (GLN96) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neural cell adhesion molecule 1, NCAM |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1yj5c1 : (GLU52) (SER110) [view usage] : b.26.1.2 |SMAD/FHA domain |SMAD/FHA domain |FHA domain |Polynucleotide kinase 3'-phosphatase |Mouse (Mus musculus) [TaxId: 10090]
d1j1la_ : (ASP55) (ASN119) [view usage] : b.82.1.12 |Double-stranded beta-helix |RmlC-like cupins |Pirin-like |Pirin |Human (Homo sapiens) [TaxId: 9606]
d3jxsa_ : (ILE71) (GLY161) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |automated matches |Rhodothermus marinus [TaxId: 29549]
d1mfna1 : (GLY7) (GLN88) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Mouse (Mus musculus) [TaxId: 10090]
d1h6ta1 : (LYS245) (GLU321) [view usage] : b.1.18.15 |Immunoglobulin-like beta-sandwich |E set domains |Internalin Ig-like domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d1svba1 : (ALA317) (PHE393) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |Envelope glycoprotein |Tick-borne encephalitis virus [TaxId: 11084]
d3uzqb_ : (VAL312) (PHE392) [view usage] : b.1.18.4 |Immunoglobulin-like beta-sandwich |E set domains |Class II viral fusion proteins C-terminal domain |automated matches |Dengue virus 1 [TaxId: 11053]
d1byoa_ : (ASP18) (VAL98) [view usage] : b.6.1.1 |Cupredoxin-like |Cupredoxins |Plastocyanin/azurin-like |Plastocyanin |White campion (Silene pratensis) [TaxId: 52853]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.82, b.19, b.69, b.18, b.6, b.1, b.26, i.17