Tableau information
Concept source: d3lnha1 amino acid (a.a.) range (PRO5)(VAL98)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO5) (PRO10) E1
(PHE17) (ARG28) E2
(THR32) (GLY40) E3
(VAL50) (GLU54) E4
(GLY58) (GLN64) E5
(ALA72) (SER82) E6
(MET92) (VAL98) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -174.5° E2
E3 -52.9° 130.2° E3
E4 128.3° -48.5° -177.8° E4
E5 -23.2° 159.0° -29.8° 151.2° E5
E6 130.9° -44.0° 155.7° -22.1° 147.3° E6
E7 -26.3° 159.1° -46.4° 135.7° -28.1° 149.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mfna2 : (ILE101) (THR184) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Mouse (Mus musculus) [TaxId: 10090]
d1rl1a_ : (TYR142) (LYS215) [view usage] : b.15.1.3 |HSP20-like chaperones |HSP20-like chaperones |GS domain |Suppressor of G2 allele of skp1 homolog, gst1 |Human (Homo sapiens) [TaxId: 9606]
d3edda1 : (PRO12) (ARG93) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Flavobacterium sp. [TaxId: 197856]
d1zvna_ : (ASN5) (ILE96) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3lnha1 : (PRO5) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d2omvb_ : (PRO6) (THR99) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d1f1sa2 : (LYS183) (VAL244) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Hyaluronate lyase precatalytic domain |Streptococcus agalactiae [TaxId: 1311]
d3lndb1 : (ALA4) (ILE96) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3edea1 : (PRO12) (ARG93) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Flavobacterium sp. [TaxId: 197856]
d2a4ca_ : (ASN5) (VAL96) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3lndc1 : (ASN5) (ILE96) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3ff8a_ : (PRO6) (ASP100) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d1edha1 : (PRO5) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1, b.15