Tableau information
Concept source: d1amma1 amino acid (a.a.) range (GLY1)(GLN83)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY1) (GLU7) E1
(HIS14) (SER19) E2
(ASN33) (ASP38) E3
(CYS41) (ARG47) E4
(HIS53) (ARG59) E5
(GLY60) (ASP64) E6
(SER77) (GLN83) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.0° E2
E3 159.7° -35.3° E3
E4 -35.5° 131.4° 156.7° E4
E5 121.4° -73.5° -39.3° 151.0° E5
E6 -15.4° 149.6° -174.6° -23.7° 136.6° E6
E7 156.1° -32.6° -25.9° 160.3° -48.6° 158.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2dada_ : (SER6) (SER88) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m8ua1 : (GLY1) (SER85) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform E [TaxId: 9913]
d1i5ia1 : (GLY1) (GLN83) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform II (B) [TaxId: 9913]
d2v2ua2 : (HIS87) (ARG168) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1amma1 : (GLY1) (GLN83) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform II (B) [TaxId: 9913]
d2m3ca1 : (MET1) (PRO83) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d3hz2a_ : (ALA3) (GLN83) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Methanosarcina acetivorans [TaxId: 2214]
d2bv2a_ : (GLY1) (GLN82) [view usage] : b.11.1.0 |gamma-Crystallin-like |gamma-Crystallin-like |automated matches |automated matches |Ciona intestinalis [TaxId: 7719]
d1elpa1 : (GLY1) (HIS83) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform IIIb (D) [TaxId: 9913]
d1a5da1 : (GLY1) (HIS83) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |beta-Crystallin |Norway rat (Rattus norvegicus), isoform E [TaxId: 10116]
d1a45a1 : (GLY1) (HIS83) [view usage] : b.11.1.1 |gamma-Crystallin-like |gamma-Crystallin-like |Crystallins/Ca-binding development proteins |gamma-Crystallin |Cow (Bos taurus), isoform F [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.11