Tableau information
Concept source: d3qbqa_ amino acid (a.a.) range (GLN162)(SER245)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN162) (THR168) E1
(SER184) (ASP189) E2
(ALA193) (ASN197) E3
(ASN197) (ASN202) E4
(GLY203) (GLN209) E5
(TYR214) (GLU225) E6
(ASP233) (SER245) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 113.3° E2
E3 -153.3° -87.5° E3
E4 -29.8° -137.9° -123.9° E4
E5 -173.2° 61.7° 33.5° 156.8° E5
E6 -2.7° 110.6° -154.8° -31.9° 171.3° E6
E7 154.6° -66.0° -23.8° 134.9° -29.6° 153.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3urfa_ : (GLN163) (TYR241) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a8ma_ : (LYS11) (ALA84) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Tumor necrosis factor (TNF) |Human (Homo sapiens) [TaxId: 9606]
d1s55a_ : (PRO163) (SER245) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
d1d4vb_ : (VAL122) (SER215) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Apoptosis-2 ligand, apo2l/TRAIL |Human (Homo sapiens) [TaxId: 9606]
d3qbqa_ : (GLN162) (SER245) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
d4e4dx_ : (GLN162) (GLN236) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
d1jtzx_ : (PRO163) (SER245) [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |TRANCE/RANKL cytokine |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.22