Tableau information
Concept source: d3mspa_ amino acid (a.a.) range (GLN15)(ASN95)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN15) (ALA21) E1
(ASP25) (ASN35) E2
(ARG39) (THR48) E3
(ARG52) (ASP56) E4
(GLY60) (PRO64) E5
(LYS65) (ASP75) E6
(ILE89) (ASN95) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.0° E2
E3 -51.0° 150.7° E3
E4 119.7° -38.7° -170.5° E4
E5 126.7° -35.7° 142.1° 42.3° E5
E6 -43.5° 159.4° -11.5° 160.0° -151.3° E6
E7 139.0° -27.4° 159.2° -26.4° -53.5° 154.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mspb_ : (LYS16) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d3d87b2 : (PHE106) (LYS195) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 |Human (Homo sapiens) [TaxId: 9606]
d3mspa_ : (GLN15) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d1wica_ : (GLU25) (GLU102) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |MSP domain containing protein 2, Mospd2 |Mouse (Mus musculus) [TaxId: 10090]
d1bf8a1 : (THR7) (PRO91) [view usage] : b.1.11.1 |Immunoglobulin-like beta-sandwich |PapD-like |Pilus chaperone |Periplasmic chaperone FimC |Escherichia coli [TaxId: 562]
d1mspa_ : (LYS16) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d1k42a_ : (ILE71) (ILE145) [view usage] : b.18.1.14 |Galactose-binding domain-like |Galactose-binding domain-like |CBM4/9 |Carbohydrate binding module from a thermostable xylanase |Rhodothermus marinus [TaxId: 29549]
d1olme2 : (HIS280) (ASP387) [view usage] : b.132.1.1 |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2bvud_ : (LYS16) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d1grwc_ : (LYS16) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2bvua_ : (LYS16) (ASN95) [view usage] : b.1.11.2 |Immunoglobulin-like beta-sandwich |PapD-like |MSP-like |Major sperm protein, MSP |Pig roundworm (Ascaris suum), alpha isoform [TaxId: 6253]
d1o6ue2 : (HIS280) (ASP387) [view usage] : b.132.1.1 |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Supernatant protein factor (SPF), C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.18, b.1, b.132