Tableau information
Concept source: d1lnua1 amino acid (a.a.) range (GLN102)(PRO181)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN102) (ASN112) E1
(VAL117) (LEU123) E2
(GLY132) (THR136) E3
(SER137) (ARG142) E4
(PHE146) (THR153) E5
(ASP159) (HIS168) E6
(VAL175) (PRO181) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 149.3° E2
E3 -31.7° 153.2° E3
E4 -43.3° 122.0° 33.1° E4
E5 163.6° -24.5° 164.7° 144.8° E5
E6 -26.1° 168.8° -34.4° -61.9° 153.3° E6
E7 153.7° -33.8° 128.3° 110.3° -38.6° 157.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2df7l_ : (THR238) (ALA329) [view usage] : b.121.4.9 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Birnaviridae-like VP |automated matches |Infectious bursal disease virus [TaxId: 10995]
d2erjc1 : (TYR47) (MET123) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor common gamma chain |Human (Homo sapiens) [TaxId: 9606]
d1l9ma3 : (VAL610) (GLU692) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), TGase E3 [TaxId: 9606]
d1qbmh2 : (SER138) (PRO216) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1kc5h2 : (SER137) (PRO215) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1e4xi2 : (SER131) (LYS206) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d3bevb_ : (LEU22) (PRO96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1m42a_ : (ILE21) (LYS102) [view usage] : b.1.18.17 |Immunoglobulin-like beta-sandwich |E set domains |Copper resistance protein C (CopC, PcoC) |Copper resistance protein C (CopC, PcoC) |Pseudomonas syringae [TaxId: 317]
d1xvsa_ : (GLN26) (VAL121) [view usage] : b.1.23.1 |Immunoglobulin-like beta-sandwich |ApaG-like |ApaG-like |ApaG |Vibrio cholerae [TaxId: 666]
d1uweh2 : (GLY134) (PRO213) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
d3ovub_ : (VAL146) (PHE219) [view usage] : b.1.28.1 |Immunoglobulin-like beta-sandwich |NEAT domain-like |NEAT domain |automated matches |Staphylococcus aureus [TaxId: 282459]
d1ub6a2 : (SER137) (LYS212) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1es0a1 : (GLN101) (SER180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC alpha chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
d2b5ic2 : (TYR47) (MET123) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Cytokine receptor common gamma chain |Human (Homo sapiens) [TaxId: 9606]
d1dqjb2 : (SER134) (LYS220) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1bfob2 : (THR145) (LYS215) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ndgb2 : (SER434) (LYS520) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1igtb2 : (SER136) (LYS222) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2df7a1 : (THR238) (ILE337) [view usage] : b.121.4.9 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Birnaviridae-like VP |Birnavirus VP2 |Infectious bursal disease virus [TaxId: 10995]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121, b.1