Protein Concepts Dictionary

Tableau information

Concept source:  d1hwnb2  amino acid (a.a.) range (GLN174)(VAL263)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN174)  (ASP179) E1
	  (ARG181)  (VAL185) E2
	  (VAL193)  (GLY197) E3
	  (LYS201)  (ILE206) E4
	  (ARG216)  (SER221) E5
	  (GLY223)  (ASN227) E6
	  (GLN258)  (VAL263) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      157.9°   E2                                        
E3      -69.6° -117.5°   E3                                 
E4       97.9°  -64.4°  146.9°   E4                          
E5      -96.3°  101.1°  106.1° -105.6°   E5                   
E6       68.1°  -96.8°  -59.2°   87.8°  161.0°   E6            
E7      -95.3°   69.4° -153.8°    9.9°  -96.5°   95.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3wo2b_ :    (PHE47)  (GLU156)   [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-18 |Human (Homo sapiens) [TaxId: 9606]
 d1pc8b2 :   (ASP167)  (PRO255)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |European mistletoe (Viscum album) [TaxId: 3972]
 d1qxma2 :   (LYS185)  (LEU285)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Hemagglutinin component Ha1 |Clostridium botulinum D phage [TaxId: 29342]
 d1hwmb2 :   (GLN174)  (SER239)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Sambucus ebulus, ebulin [TaxId: 28503]
 d3aj6a2 :   (LYS185)  (LEU285)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |automated matches |Clostridium botulinum [TaxId: 1491]
 d2rg9b2 :   (ARG173)  (PRO263)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
 d1ybia2 :   (LYS189)  (ASN292)   [view usage] : b.42.2.0 |beta-Trefoil |Ricin B-like lectins |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d1ce7b2 :   (ASP167)  (PHE255)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |European mistletoe (Viscum album) [TaxId: 3972]
 d4lo0a2 :   (LYS189)  (ASN292)   [view usage] : b.42.2.0 |beta-Trefoil |Ricin B-like lectins |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
 d1hwnb2 :   (GLN174)  (VAL263)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Sambucus ebulus, ebulin [TaxId: 28503]
 d1ggpb2 :   (GLN176)  (PHE267)   [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Plant cytotoxin B-chain (lectin) |Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.42