Tableau information
Concept source: d2vkxa2 amino acid (a.a.) range (LYS605)(PHE689)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS605) (ARG610) E1
(ASN615) (ASP625) E2
(TYR634) (ALA640) E3
(PRO647) (PRO652) E4
(HIS657) (SER662) E5
(TYR669) (ALA675) E6
(ALA685) (PHE689) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 157.1° E2
E3 -51.0° 146.3° E3
E4 114.0° -43.3° 153.3° E4
E5 -42.9° 159.8° -28.8° 155.0° E5
E6 141.1° -25.5° 166.8° -37.3° 150.4° E6
E7 -19.4° 159.1° -34.5° 124.7° -38.0° 158.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vkwa2 : (LYS605) (ALA692) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neural cell adhesion molecule 1, NCAM |Human (Homo sapiens) [TaxId: 9606]
d1sy6a2 : (LYS122) (ALA201) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |CD3 epsilon chain ectodomain fragment |Human (Homo sapiens) [TaxId: 9606]
d2yxma_ : (PRO16) (ARG94) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2di8a1 : (SER22) (GLU101) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin b |Human (Homo sapiens) [TaxId: 9606]
d3b83c_ : (PHE5) (THR89) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cxkd_ : (THR874) (LYS953) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |Calmodulin binding transcription activator 1 |Human (Homo sapiens) [TaxId: 9606]
d2aava1 : (HIS1867) (GLY1954) [view usage] : b.1.18.10 |Immunoglobulin-like beta-sandwich |E set domains |Filamin repeat (rod domain) |Filamin a |Human (Homo sapiens) [TaxId: 9606]
d1ry7b1 : (LEU163) (GLU247) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Fibroblast growth factor receptor, FGFR |Human (Homo sapiens), FGFR3c [TaxId: 9606]
d1iarb1 : (GLU6) (PRO92) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interleukin-4 receptor alpha chain |Human (Homo sapiens) [TaxId: 9606]
d2rb8a_ : (ILE809) (LEU893) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ymmd1 : (THR20) (ASP92) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Human (Homo sapiens), alpha-chain [TaxId: 9606]
d2cxka1 : (THR874) (LYS953) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |Calmodulin binding transcription activator 1 |Human (Homo sapiens) [TaxId: 9606]
d1xiwa_ : (TYR15) (ARG94) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |CD3 epsilon chain ectodomain fragment |Human (Homo sapiens) [TaxId: 9606]
d4ov6g_ : (ARG6) (ASN91) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ggbh2 : (VAL121) (LYS222) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1ya5a2 : (ARG109) (GLU196) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cxkb_ : (THR874) (LYS953) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |Calmodulin binding transcription activator 1 |Human (Homo sapiens) [TaxId: 9606]
d2f8va1 : (GLN13) (ALA99) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3p2ta2 : (SER99) (SER195) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i69a2 : (PRO315) (GLY401) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |West Nile virus [TaxId: 11082]
d1qr4a1 : (LYS4) (VAL87) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin |Chicken (Gallus gallus) [TaxId: 9031]
d2dtgc2 : (ALA118) (CYS215) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2xy2a1 : (SER28) (GLN113) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bgla1 : (SER223) (ARG333) [view usage] : b.1.4.1 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |beta-Galactosidase/glucuronidase domain |beta-Galactosidase, domains 2 and 4 |Escherichia coli [TaxId: 562]
d1tena_ : (SER807) (PHE889) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin |Human (Homo sapiens) [TaxId: 9606]
d2vkwb2 : (LYS605) (PHE689) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neural cell adhesion molecule 1, NCAM |Human (Homo sapiens) [TaxId: 9606]
d1cwva1 : (LEU503) (GLY596) [view usage] : b.1.14.1 |Immunoglobulin-like beta-sandwich |Invasin/intimin cell-adhesion fragments |Invasin/intimin cell-adhesion fragments |Invasin |Yersinia pseudotuberculosis [TaxId: 633]
d2rika1 : (PRO1) (GLN92) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1fnha1 : (THR11) (GLU92) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Fibronectin, different Fn3 modules |Human (Homo sapiens) [TaxId: 9606]
d2f8va2 : (ARG109) (GLY195) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b5ha2 : (THR25) (HIS102) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Cervical EMMPRIN |Human (Homo sapiens) [TaxId: 9606]
d3cu7a5 : (GLN462) (GLU564) [view usage] : b.1.29.6 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG5-like |Complement C5 MG5 |Human (Homo sapiens) [TaxId: 9606]
d2pa7b_ : (HIS49) (LEU109) [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA |Aneurinibacillus thermoaerophilus [TaxId: 143495]
d3ly6a4 : (PRO587) (PRO686) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), tissue isozyme [TaxId: 9606]
d2cxke_ : (THR874) (SER954) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |Calmodulin binding transcription activator 1 |Human (Homo sapiens) [TaxId: 9606]
d1akpa_ : (ALA3) (PHE113) [view usage] : b.1.7.1 |Immunoglobulin-like beta-sandwich |Actinoxanthin-like |Actinoxanthin-like |Kedarcidin |Actinomycete ATCC 53650, strain L585-6 [TaxId: 38989]
d3b83h_ : (PHE5) (LEU92) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a73b1 : (PHE808) (PRO911) [view usage] : b.1.29.8 |Immunoglobulin-like beta-sandwich |Macroglobulin |Complement C3 MG7-like |Complement C3 MG7 |Human (Homo sapiens) [TaxId: 9606]
d2kbga_ : (SER7) (PHE91) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2eo1a_ : (ALA17) (VAL96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i8la2 : (PRO111) (ASN198) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |CD80, second domain |Human (Homo sapiens) [TaxId: 9606]
d1plgh2 : (SER124) (LYS212) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1jhja_ : (VAL64) (PRO161) [view usage] : b.18.1.9 |Galactose-binding domain-like |Galactose-binding domain-like |APC10-like |APC10/DOC1 subunit of the anaphase-promoting complex |Human (Homo sapiens) [TaxId: 9606]
d3qp3b_ : (ALA8) (GLY100) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Titin |Human (Homo sapiens), different modules [TaxId: 9606]
d1xiwe_ : (TYR15) (ARG94) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |CD3 epsilon chain ectodomain fragment |Human (Homo sapiens) [TaxId: 9606]
d4ov6f_ : (ASP7) (ASP97) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hnga2 : (PRO104) (PRO175) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |CD2, second domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2vkxa2 : (LYS605) (PHE689) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Neural cell adhesion molecule 1, NCAM |Human (Homo sapiens) [TaxId: 9606]
d2a38a2 : (ARG109) (GLN194) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wmra1 : (ASN94) (ALA181) [view usage] : b.133.1.0 |Dextranase, N-terminal domain |Dextranase, N-terminal domain |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d3qp3a_ : (ALA8) (THR99) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Titin |Human (Homo sapiens), different modules [TaxId: 9606]
d2yuva_ : (PRO16) (GLY96) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.18, b.1, b.133