Tableau information
Concept source: d1ay1h2 amino acid (a.a.) range (SER122)(PRO208)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER122) (PRO128) E1
(THR133) (LYS139) E2
(GLU144) (TRP150) E3
(GLY158) (SER168) E4
(ASP169) (THR180) E5
(GLN187) (ALA197) E6
(SER199) (PRO208) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.2° E2
E3 -35.8° 156.1° E3
E4 139.2° -24.0° 157.0° E4
E5 -28.7° 167.2° -14.1° 165.7° E5
E6 155.8° -22.2° 162.2° -36.3° 157.5° E6
E7 -22.7° 145.8° -39.7° 124.6° -41.2° 158.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ypze2 : (SER127) (SER201) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), delta-chain [TaxId: 9606]
d2o14a1 : (PHE80) (LYS154) [view usage] : b.18.1.32 |Galactose-binding domain-like |Galactose-binding domain-like |YxiM N-terminal domain-like |Hypothetical protein YxiM |Bacillus subtilis [TaxId: 1423]
d2c9aa2 : (GLN88) (GLY179) [view usage] : b.29.1.25 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |MAM domain |Receptor-type tyrosine-protein phosphatase mu |Human (Homo sapiens) [TaxId: 9606]
d2ii7b_ : (THR7) (ARG105) [view usage] : b.123.1.0 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |automated matches |automated matches |Anabaena sp. [TaxId: 1167]
d1t7va1 : (SER188) (ALA277) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain |Human (Homo sapiens) [TaxId: 9606]
d1dsya_ : (TYR163) (GLY262) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |C2 domain from protein kinase c (alpha) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4lxoa2 : (VAL1426) (TYR1507) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jdpa_ : (GLY4) (VAL77) [view usage] : b.115.1.1 |Calcium-mediated lectin |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1od5a2 : (PRO382) (THR446) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]
d2ck2b_ : (VAL11) (ILE96) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a5fh2 : (LEU131) (PRO216) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1uadc_ : (PRO7) (VAL88) [view usage] : b.1.18.18 |Immunoglobulin-like beta-sandwich |E set domains |Other IPT/TIG domains |Exocyst complex component Sec5, Ral-binding domain |Mouse (Mus musculus) [TaxId: 10090]
d2bcma_ : (GLY42) (GLY134) [view usage] : b.2.3.0 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Bacterial adhesins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2ji1a1 : (VAL50) (ASN126) [view usage] : b.1.13.1 |Immunoglobulin-like beta-sandwich |Superoxide reductase-like |Superoxide reductase-like |automated matches |Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]
d1biha4 : (LYS317) (ASN395) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Hemolin |Moth (Hyalophora cecropia) [TaxId: 7123]
d2ifga1 : (THR195) (GLN279) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |High affinity nerve growth factor receptor TrkA, different domains |Human (Homo sapiens) [TaxId: 9606]
d1ylld_ : (GLU130) (SER195) [view usage] : b.82.1.17 |Double-stranded beta-helix |RmlC-like cupins |PA5104-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1sppa_ : (THR28) (LEU108) [view usage] : b.23.1.1 |CUB-like |Spermadhesin, CUB domain |Spermadhesin, CUB domain |Major seminal plasma glycoprotein PSP-I |Pig (Sus scrofa) [TaxId: 9823]
d2yr3a_ : (LYS19) (HIS99) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3esgb_ : (VAL128) (GLN184) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 216595]
d3bplb1 : (PRO7) (TRP86) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qwqb_ : (VAL11) (ASP97) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uvqa1 : (GLU88) (PRO183) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC alpha chain, C-terminal domain |Human (Homo sapiens), HLA-DQ group [TaxId: 9606]
d3rnsa1 : (GLU46) (ILE101) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Leptotrichia buccalis [TaxId: 523794]
d2lvca_ : (HIS12) (ILE90) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2om5a4 : (LEU300) (SER377) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3rzwa_ : (VAL11) (THR90) [view usage] : b.1.2.0 |Immunoglobulin-like beta-sandwich |Fibronectin type III |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v9qa2 : (ARG173) (VAL258) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1aqkh2 : (SER130) (PRO223) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Human (Homo sapiens) [TaxId: 9606]
d4jkma2 : (GLU186) (GLU270) [view usage] : b.1.4.0 |Immunoglobulin-like beta-sandwich |beta-Galactosidase/glucuronidase domain |automated matches |automated matches |Clostridium perfringens [TaxId: 195102]
d2rq8a_ : (PRO9) (GLU88) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Titin |Human (Homo sapiens), different modules [TaxId: 9606]
d1tdqa2 : (GLY103) (GLU185) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Tenascin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1yllc_ : (GLY129) (SER195) [view usage] : b.82.1.17 |Double-stranded beta-helix |RmlC-like cupins |PA5104-like |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1igch2 : (SER127) (PRO219) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d2ii8b_ : (THR7) (THR104) [view usage] : b.123.1.0 |Hypothetical protein TM1070 |Hypothetical protein TM1070 |automated matches |automated matches |Anabaena sp. [TaxId: 1167]
d4oy6a_ : (GLN132) (GLY228) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d1ddhb_ : (GLN6) (TRP95) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |beta2-microglobulin |Mouse (Mus musculus) [TaxId: 10090]
d1ieaa1 : (ASP82) (PHE180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC alpha chain, C-terminal domain |Mouse (Mus musculus), I-E group [TaxId: 10090]
d2ji2a1 : (VAL50) (ASN126) [view usage] : b.1.13.1 |Immunoglobulin-like beta-sandwich |Superoxide reductase-like |Superoxide reductase-like |automated matches |Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]
d2jdua_ : (GLY4) (VAL77) [view usage] : b.115.1.1 |Calcium-mediated lectin |Calcium-mediated lectin |Calcium-mediated lectin |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1ay1h2 : (SER122) (PRO208) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d3am2a1 : (THR235) (LYS318) [view usage] : b.18.1.37 |Galactose-binding domain-like |Galactose-binding domain-like |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens enterotoxin (CPE), C-terminal domain |Clostridium perfringens [TaxId: 1502]
d3esga_ : (VAL128) (GLN184) [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 216595]
d3abza3 : (PHE459) (ASP559) [view usage] : b.179.1.1 |Anthrax protective antigen N-terminal-like |PA14-like |PA14 |Beta-glucosidase PA14 domain |Kluyveromyces marxianus [TaxId: 4911]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, b.29, b.18, b.2, b.1, b.179, b.7, b.115, b.123, b.23