Tableau information
Concept source: d4p4ke2 amino acid (a.a.) range (GLU88)(ALA180)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU88) (PHE92) E1
(PRO102) (ASP110) E2
(LEU117) (CYS123) E3
(GLY131) (THR141) E4
(PHE145) (THR152) E5
(GLU158) (HIS167) E6
(LEU174) (ALA180) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 167.4° E2
E3 -31.6° 150.1° E3
E4 137.4° -30.7° 145.8° E4
E5 -27.2° 163.3° -22.5° 163.6° E5
E6 154.6° -27.7° 170.3° -40.7° 153.7° E6
E7 -16.3° 152.4° -31.0° 125.8° -37.8° 158.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1x44a1 : (THR11) (LEU96) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Myosin-binding protein C, slow-type |Human (Homo sapiens) [TaxId: 9606]
d4ozfa2 : (VAL86) (PRO180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iaoa1 : (THR83) (TRP178) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC alpha chain, C-terminal domain |Mouse (Mus musculus), I-A group [TaxId: 10090]
d2vo8a1 : (ALA957) (GLY1045) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Exo-alpha-sialidase |Clostridium perfringens [TaxId: 1502]
d3s6ca3 : (VAL178) (TRP270) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1evua3 : (ILE632) (ARG727) [view usage] : b.1.5.1 |Immunoglobulin-like beta-sandwich |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Transglutaminase, two C-terminal domains |Human (Homo sapiens), blood isozyme [TaxId: 9606]
d1bqlh2 : (SER123) (LYS212) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1e5ba_ : (VAL265) (GLY332) [view usage] : b.2.2.1 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family II |Endo-1,4-beta xylanase D, xylan binding domain, XBD |Cellulomonas fimi [TaxId: 1708]
d3ov6a3 : (VAL186) (HIS280) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bc4d2 : (ARG95) (PRO191) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mq0a_ : (THR457) (GLU542) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3f01a_ : (GLY143) (PRO246) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptogamin I |Human (Homo sapiens) [TaxId: 9606]
d1ao7a1 : (THR182) (TRP274) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC, alpha-3 domain |Human (Homo sapiens) [TaxId: 9606]
d1faih2 : (LYS126) (LYS220) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1ya5a1 : (PRO11) (ALA99) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4mnga2 : (GLU185) (TYR276) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hg0a2 : (THR314) (SER400) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |West Nile virus [TaxId: 11082]
d1zt4a1 : (VAL185) (TRP277) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |CD1, alpha-3 domain |Human (Homo sapiens), CD1d [TaxId: 9606]
d1ccza2 : (LYS98) (PRO170) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |CD2-binding domain of CD58, second domain |Human (Homo sapiens) [TaxId: 9606]
d1k8ib1 : (ALA95) (PRO190) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class II MHC beta chain, C-terminal domain |Mouse (Mus musculus), H2-DM [TaxId: 10090]
d3u0pc2 : (VAL185) (TRP277) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |CD1, alpha-3 domain |Human (Homo sapiens), CD1a [TaxId: 9606]
d1dr9a2 : (PRO111) (ASN198) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |CD80, second domain |Human (Homo sapiens) [TaxId: 9606]
d1acyh2 : (SER120) (LYS222) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d1cbvh2 : (SER128) (LYS217) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
d3qiba2 : (ASP82) (PHE180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2fsec1 : (THR83) (PHE180) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2avga1 : (VAL8) (HIS107) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Cardiac myosin binding protein C, different domains |Human (Homo sapiens) [TaxId: 9606]
d1rsya_ : (GLY143) (PRO246) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |Synaptogamin I |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3we1a_ : (GLU590) (LYS673) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Dengue virus type 4 [TaxId: 408871]
d1q94a1 : (THR182) (TRP274) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC, alpha-3 domain |Human (Homo sapiens) [TaxId: 9606]
d4f7ea2 : (VAL185) (TRP277) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |CD1, alpha-3 domain |Cow (Bos taurus) [TaxId: 9913]
d1mq8a1 : (VAL89) (THR184) [view usage] : b.1.1.3 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C2 set domains |Intercellular cell adhesion molecule-1 (ICAM-1) |Human (Homo sapiens) [TaxId: 9606]
d1r3he1 : (ARG5181) (ARG5273) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Class I MHC homolog, alpha-3 domain |Mouse (Mus musculus), t10 [TaxId: 10090]
d2bc4b2 : (ARG95) (PRO191) [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4p4ke2 : (GLU88) (ALA180) [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.2, b.1, b.7