Protein Concepts Dictionary

Tableau information

Concept source:  d1c9sb_  amino acid (a.a.) range (SER7)(GLY74)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER7)   (LYS13) E1
	   (ASP17)   (GLY27) E2
	   (HIS33)   (ASP39) E3
	   (GLU42)   (PHE48) E4
	   (SER53)   (GLY59) E5
	   (TYR62)   (ARG66) E6
	   (GLY68)   (GLY74) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
E2      162.7°   E2                                        
E3      -35.5°  161.4°   E3                                 
E4      161.7°    8.8° -156.5°   E4                          
E5        5.7°  161.3°  -35.6° -157.9°   E5                   
E6      160.3°  -34.2°  127.3°  -30.4° -156.3°   E6            
E7      -50.1°  114.1°  -84.4°  118.1°  -52.2°  148.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1c9sa_ :     (SER7)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d3ztea_ :     (ASP8)   (SER74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1c9sb_ :     (SER7)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d1qawb_ :     (SER7)   (GLU73)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d3ztel_ :     (ASN7)   (SER74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1c9sj_ :     (SER7)   (GLU73)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d3ztej_ :     (ASP8)   (SER74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |automated matches |Bacillus licheniformis [TaxId: 1402]
 d2zcza_ :     (SER7)   (SER72)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d2exsb_ :     (ASP8)   (SER72)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d1c9sm_ :     (ASP8)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d1wapb_ :     (ASP8)   (GLU73)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus subtilis [TaxId: 1423]
 d1wapa_ :     (ASP8)   (GLU73)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus subtilis [TaxId: 1423]
 d1c9sl_ :     (ASP8)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d1c9sg_ :     (ASP8)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]
 d1c9sc_ :     (ASP8)   (GLY74)   [view usage] : b.82.5.1 |Double-stranded beta-helix |TRAP-like |Trp RNA-binding attenuation protein (TRAP) |Trp RNA-binding attenuation protein (TRAP) |Bacillus stearothermophilus [TaxId: 1422]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82