Protein Concepts Dictionary

Tableau information

Concept source:  d2wa6a1  amino acid (a.a.) range (TRP14)(SER124)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TRP14)   (LEU30) H1
	   (ASN39)   (SER45) H2
	   (LEU48)   (GLN59) H3
	   (ARG73)   (SER91) H4
	   (SER99)  (GLY105) H5
	  (LEU107)  (SER124) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       44.8°   H2                                 
H3       66.3°  -90.0°   H3                          
H4       83.2°   94.9°   20.6°   H4                   
H5      -99.2° -122.8°  117.1°  128.4°   H5            
H6       55.6°   84.8°   11.8°   32.3° -111.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2r8ua_ :    (SER16)  (ASN118)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fera1 :    (ILE27)  (SER134)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mb8a1 :    (HIS57)  (SER174)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Actin binding domain of plectin |Human (Homo sapiens) [TaxId: 9606]
 d1wyra_ :     (GLY7)  (GLU115)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hopb1 :    (ALA39)  (SER151)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3co1a_ :    (SER16)  (ASN118)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4q57b1 :    (ASN24)  (ASP148)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1wyma_ :    (ASP15)  (ARG131)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1dxxa1 :    (ARG13)  (GLN119)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Dystrophin |Human (Homo sapiens) [TaxId: 9606]
 d3hopa1 :    (ALA39)  (SER151)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wa6a1 :    (TRP14)  (SER124)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wa5a1 :    (TRP14)  (SER124)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hocb1 :    (ILE44)  (SER151)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1v5ka_ :    (ARG10)  (SER110)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Microtubule-associated protein eb1, N-terminal microtubule binding domain |Mouse (Mus musculus) [TaxId: 10090]
 d2eyia1 :    (LEU45)  (ILE139)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hoca1 :    (ALA39)  (SER151)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wa7a1 :    (ALA12)  (SER124)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2l3ga_ :    (ASN12)  (ILE124)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1vkaa_ :    (SER16)  (ASN118)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Microtubule-associated protein eb1, N-terminal microtubule binding domain |Human (Homo sapiens) [TaxId: 9606]
 d2r0oa1 :    (GLU49)  (ILE155)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ujoa_ :    (LEU10)  (LYS124)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Transgelin |Mouse (Mus musculus) [TaxId: 10090]
 d3horb1 :    (ILE44)  (ILE150)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3f7pa1 :    (GLU66)  (GLN172)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wkua2 :   (ALA160)  (ALA266)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d87a_ :     (ILE8)  (GLY115)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ferc1 :    (TRP24)  (SER134)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qjza_ :    (SER16)  (ASN118)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Microtubule-associated protein eb1, N-terminal microtubule binding domain |Human (Homo sapiens) [TaxId: 9606]
 d1h67a_ :    (GLU31)  (LYS134)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Calponin |Chicken (Gallus gallus) [TaxId: 9031]
 d1vkab_ :    (SER16)  (ASN118)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Microtubule-associated protein eb1, N-terminal microtubule binding domain |Human (Homo sapiens) [TaxId: 9606]
 d3hora1 :    (ILE44)  (ILE150)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1sh5a1 :     (ARG9)  (GLN119)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Actin binding domain of plectin |Human (Homo sapiens) [TaxId: 9606]
 d2r0ob1 :    (GLU49)  (ILE155)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qaga1 :    (ASP31)  (TRP134)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Utrophin |Human (Homo sapiens) [TaxId: 9606]
 d1tjta1 :    (GLU44)  (ILE150)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1aoaa1 :   (ARG144)  (SER246)   [view usage] : a.40.1.1 |CH domain-like |Calponin-homology domain, CH-domain |Calponin-homology domain, CH-domain |Fimbrin (Plastin), actin-crosslinking domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.40