Protein Concepts Dictionary

Tableau information

Concept source:  d1troa_  amino acid (a.a.) range (SER8)(VAL103)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER8)   (ASN32) H1
	   (LEU36)   (MET42) H2
	   (PRO45)   (GLY64) H3
	   (SER67)   (GLY76) H4
	   (ILE79)   (ALA91) H5
	   (PRO93)  (VAL103) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      144.3°   H2                                 
H3      -88.7°  111.8°   H3                          
H4       65.0°  -86.5°  151.0°   H4                   
H5      -91.9°  122.5°  -67.5°  122.3°   H5            
H6       29.7° -118.4°  -88.7°   62.5° -119.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2oz9r_ :     (SER8)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1zt9a_ :     (SER5)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1wrpr_ :    (MET11)  (GLU102)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d3wrpa_ :    (GLU13)  (SER107)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1troa_ :     (SER8)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1troc_ :    (MET11)  (LYS106)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1trra_ :     (SER8)  (LEU105)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1troe_ :    (ALA12)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1rcsa_ :    (GLN17)  (SER107)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d3ssxr_ :     (SER8)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d3ssxn_ :     (SER8)  (LYS106)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1trog_ :     (PRO6)  (LEU105)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d1jhga_ :     (SER8)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
 d3sswn_ :     (SER8)  (VAL103)   [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.4