Protein Concepts Dictionary

Tableau information

Concept source:  d4kk2a_  amino acid (a.a.) range (ASN10)(VAL174)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN10)   (GLU31) H1
	   (ASP34)   (TYR46) H2
	   (MET53)   (LYS67) H3
	   (THR72)  (GLU102) H4
	  (GLY119)  (PHE141) H5
	  (TYR147)  (VAL174) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      148.2°   H2                                 
H3      111.7°  -75.0°   H3                          
H4      -71.5°   88.9°  152.7°   H4                   
H5      101.6°  -89.0°  -14.5° -161.4°   H5            
H6      -93.8°   68.4°  141.2°  -22.3°  155.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2azla_ :     (ASN9)  (ARG150)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Thermotoga maritima [TaxId: 2336]
 d1yhla_ :     (MET4)  (ASP176)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4e1ea_ :     (SER3)  (ASP176)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4kk2a_ :    (ASN10)  (VAL174)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Artemisia spiciformis [TaxId: 235357]
 d1wl2a_ :     (ASN9)  (ARG150)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Thermotoga maritima [TaxId: 243274]
 d1vg7a_ :     (ASN9)  (ARG150)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Octoprenyl-diphosphate synthase |Thermotoga maritima [TaxId: 2336]
 d1ubxa_ :    (VAL23)  (ILE190)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Chicken (Gallus gallus) [TaxId: 9031]
 d1yhka_ :     (ALA2)  (SER173)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d2f7mf_ :    (PHE21)  (THR177)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dwba_ :     (ALA2)  (SER173)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d1v4ka_ :    (LEU13)  (ARG150)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Octoprenyl-diphosphate synthase |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.128