Protein Concepts Dictionary

Tableau information

Concept source:  d2f8yb_  amino acid (a.a.) range (THR1998)(PHE2085)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (THR1998) (ARG2005) H1
	 (VAL2008) (HIS2019) H2
	 (ALA2032) (ALA2038) H3
	 (VAL2042) (GLY2052) H4
	 (THR2064) (GLU2072) H5
	 (TYR2075) (PHE2085) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -152.6°   H2                                 
H3      -12.8° -162.0°   H3                          
H4     -143.3°   -9.3° -153.2°   H4                   
H5      -31.4°  174.8°  -20.6° -173.4°   H5            
H6      122.5°  -30.2° -132.3°  -21.0° -152.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2l6ba_ :    (THR11)   (LYS97)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d4k5cb_ :    (PRO97)  (ALA183)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Escherichia coli [TaxId: 562]
 d2fo1e1 :  (VAL1056) (LEU1147)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |Lin-12 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3aaac_ :     (CYS2)   (GLY91)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b95b_ :   (PRO745)  (LEU828)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3b95b_ :   (THR844)  (ASP931)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2dznc_ :    (PRO75)  (GLY163)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3b7bb_ :   (SER744)  (LEU828)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1nfie_ :   (THR185)  (LEU269)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |I-kappa-B-alpha |Human (Homo sapiens) [TaxId: 9606]
 d1s70b_ :   (THR201)  (LEU290)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |Myosin phosphatase targeting subunit 1, MYPT1 |Chicken (Gallus gallus) [TaxId: 9031]
 d2v5qc1 :    (THR49)  (GLY136)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |4ank |unidentified [TaxId: 32644]
 d1n0qa_ :     (THR4)   (GLY91)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |3ank |Synthetic
 d1n0qb_ :     (THR4)   (GLY91)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |3ank |Synthetic

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.211,    k.37