Protein Concepts Dictionary

Tableau information

Concept source:  d1ly9a_  amino acid (a.a.) range (ASN19)(ASN108)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN19)   (TYR37) H1
	   (SER44)   (GLY59) H2
	   (PRO62)   (GLY68) H3
	   (GLY77)   (SER83) H4
	   (SER83)   (PHE89) H5
	   (THR96)  (ASN108) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      132.6°   H2                                 
H3      117.1°  -28.6°   H3                          
H4       63.7°   94.7°   66.5°   H4                   
H5      -53.8°  102.8°  114.9° -108.6°   H5            
H6      140.0°  -80.5°  -80.5°  -96.9°  153.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1lgaa_ :    (ILE24)   (GLN94)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d1arpa_ :    (ASN20)  (CYS129)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Arthromyces ramosus [TaxId: 5451]
 d3q3ua_ :    (ALA12)   (PHE94)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Trametes cervina [TaxId: 295351]
 d1b82b_ :    (ILE24)   (GLN94)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d1b85a_ :    (ILE24)   (GLN94)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d1ly8a_ :    (ASN19)  (ASN108)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d1ly9a_ :    (ASN19)  (ASN108)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d4bm1a_ :    (ASN12)  (GLN103)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]
 d1ly8b_ :    (ASN19)  (ASN108)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d1b85b_ :    (ASP11)   (GLN94)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
 d1b82a_ :    (ILE24)  (LYS100)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93