Protein Concepts Dictionary

Tableau information

Concept source:  d2f6sb_  amino acid (a.a.) range (TYR66)(TYR174)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR66)   (MSE77) H1
	   (ASN83)   (HIS96) H2
	  (GLY101)  (LYS119) H3
	  (ASP128)  (SER139) H4
	  (ASP143)  (LEU154) H5
	  (ASP160)  (TYR174) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -167.3°   H2                                 
H3      -26.7°  160.9°   H3                          
H4      110.4°  -82.1°   87.2°   H4                   
H5      -46.8°  121.9°  -59.2° -138.6°   H5            
H6      143.6°  -42.0°  145.6°  -69.3°  151.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2f6sb_ :    (TYR66)  (TYR174)   [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |Cell filamentation protein Fic |Helicobacter pylori [TaxId: 210]
 d3zlma_ :    (ASN74)  (TYR185)   [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |automated matches |Neisseria meningitidis [TaxId: 487]
 d2f6sa1 :    (LEU67)  (TYR174)   [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |Cell filamentation protein Fic |Helicobacter pylori [TaxId: 210]
 d1rw2a_ :    (ALA37)  (PHE146)   [view usage] : a.118.19.1 |alpha-alpha superhelix |C-terminal domain of Ku80 |C-terminal domain of Ku80 |C-terminal domain of Ku80 |Human (Homo sapiens) [TaxId: 9606]
 d3s6aa_ :    (ASN74)  (TYR185)   [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |automated matches |Neisseria meningitidis [TaxId: 491]
 d2g03a1 :    (TYR77)  (TYR185)   [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |Hypothetical protein NMA0004 |Neisseria meningitidis [TaxId: 487]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118,   a.265