Protein Concepts Dictionary

Tableau information

Concept source:  d4d8fb_  amino acid (a.a.) range (LYS37)(THR162)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS37)   (ASN49) H1
	   (MET58)   (SER67) H2
	   (SER71)   (VAL97) H3
	  (PRO107)  (GLY135) H4
	  (GLU138)  (ALA144) H5
	  (ARG148)  (THR162) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      -73.1°   H2                                 
H3     -132.9° -134.2°   H3                          
H4       27.5°  -45.7° -149.2°   H4                   
H5      160.5°   91.6°  -66.5°  135.4°   H5            
H6     -146.8° -133.6°  -16.1° -164.8°   52.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bmqa_ :    (SER14)  (ARG139)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
 d4d8fd_ :    (LYS37)  (THR162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]
 d4bmrb_ :    (SER14)  (ARG139)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
 d4d8fb_ :    (LYS37)  (THR162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]
 d4m1ha_ :    (TRP38)  (THR162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]
 d2rccb_ :    (ALA40)  (ASP148)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus halodurans [TaxId: 272558]
 d3olja_ :   (LEU109)  (ASP216)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m1hd_ :    (LYS37)  (THR162)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25