Protein Concepts Dictionary

Tableau information

Concept source:  d4a5gb_  amino acid (a.a.) range (GLY78)(PHE173)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY78)   (ALA92) H1
	   (SER98)  (GLY115) H2
	  (ASN132)  (SER138) H3
	  (GLY146)  (GLY158) H4
	  (ASN160)  (ALA166) H5
	  (LEU167)  (PHE173) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      110.4°   H2                                 
H3      127.3°  -34.3°   H3                          
H4      -15.7° -124.9° -134.8°   H4                   
H5      100.0°   59.8°  -88.5°  111.8°   H5            
H6      104.5°   64.3°  -90.5°  115.0°   -7.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qgja_ :    (GLY73)  (PHE167)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Thale cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]
 d3hdla_ :    (GLU78)  (ILE171)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Roystonea regia [TaxId: 145709]
 d4a5gb_ :    (GLY78)  (PHE173)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Radish (Raphanus sativus) [TaxId: 3726]
 d1pa2a_ :    (GLY76)  (PHE171)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Thale cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]
 d1bgpa_ :    (ARG81)  (ILE181)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]
 d1scha_ :    (GLY76)  (ILE171)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Peanut (Arachis hypogaea) [TaxId: 3818]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93