Protein Concepts Dictionary

Tableau information

Concept source:  d4m32d_  amino acid (a.a.) range (THR16)(ARG159)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR16)   (TRP42) H1
	   (PHE49)   (ASP78) H2
	   (ARG84)   (ALA90) H3
	  (SER103)  (HIS126) H4
	  (HIS126)  (GLU132) H5
	  (ASP133)  (ARG159) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -158.6°   H2                                 
H3      -95.4°  104.8°   H3                          
H4     -171.3°   19.7°   90.3°   H4                   
H5     -133.5°   37.1°  121.9°   38.1°   H5            
H6       25.3° -168.5°  -70.4° -160.6° -154.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4m33a_ :    (PRO17)  (ARG159)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4m32d_ :    (THR16)  (ARG159)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d1veia_ :    (SER10)  (GLU157)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
 d4a25d_ :    (SER24)  (ARG165)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Kineococcus radiotolerans [TaxId: 131568]
 d4a25a_ :    (SER24)  (ARG165)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Kineococcus radiotolerans [TaxId: 131568]
 d2z90b_ :    (THR16)  (GLY146)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4m35a_ :    (THR16)  (ARG159)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d1velc_ :    (SER10)  (GLU157)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
 d2z90a_ :    (THR16)  (ASN158)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4m35b_ :    (PRO17)  (ILE154)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2yw7b1 :    (VAL17)  (ARG153)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
 d1vele_ :    (SER10)  (GLU157)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
 d4m34a_ :    (THR16)  (ILE154)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4a25b_ :    (ARG25)  (ARG165)   [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Kineococcus radiotolerans [TaxId: 131568]
 d1jtsj_ :    (PHE40)  (ILE166)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25