Protein Concepts Dictionary

Tableau information

Concept source:  d1egea1  amino acid (a.a.) range (ALA243)(HIS390)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA243)  (GLU280) H1
	  (GLN292)  (GLY322) H2
	  (THR326)  (GLY352) H3
	  (GLY352)  (ASN357) H4
	  (PRO361)  (TYR375) H5
	  (SER379)  (HIS390) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -154.1°   H2                                 
H3       26.2° -156.0°   H3                          
H4      134.9°   47.7° -113.3°   H4                   
H5     -157.3°   40.3° -156.9°  -67.0°   H5            
H6     -116.8°   58.0° -141.8°  104.6°   48.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pg0a2 :   (LYS236)  (GLY370)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d1buca1 :   (LYS234)  (ARG383)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Butyryl-CoA dehydrogenase, C-domain |Megasphaera elsdenii [TaxId: 907]
 d1ws9a1 :   (GLY237)  (VAL387)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Acyl-CoA dehydrogenase |Thermus thermophilus [TaxId: 274]
 d3r7kc2 :   (GLY251)  (GLY398)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2r0ma1 :   (VAL257)  (ILE384)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1egca1 :   (GLY244)  (LYS395)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Medium chain acyl-CoA dehydrogenase, C-domain |Human (Homo sapiens) [TaxId: 9606]
 d3mpja2 :   (GLY234)  (GLY383)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Desulfococcus multivorans [TaxId: 897]
 d3mpjb2 :   (ALA235)  (GLY383)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Desulfococcus multivorans [TaxId: 897]
 d1egea1 :   (ALA243)  (HIS390)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Medium chain acyl-CoA dehydrogenase, C-domain |Human (Homo sapiens) [TaxId: 9606]
 d2pg0b2 :   (LEU245)  (GLY370)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d4irna2 :   (GLY233)  (GLY380)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Oscillatoria sp. [TaxId: 272129]
 d4u83a2 :   (ASN236)  (LEU375)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Brucella abortus [TaxId: 1104320]
 d2ebaa2 :   (LEU234)  (ILE379)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1udyb1 :   (GLY244)  (ARG393)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Medium chain acyl-CoA dehydrogenase, C-domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ukwa1 :   (GLY261)  (ILE407)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Medium chain acyl-CoA dehydrogenase, C-domain |Thermus thermophilus [TaxId: 274]
 d2fona2 :   (PRO273)  (GLY448)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
 d2jifa2 :   (GLY282)  (TYR432)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1siqa1 :   (LEU239)  (GLY386)   [view usage] : a.29.3.1 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |Medium chain acyl-CoA dehydrogenase-like, C-terminal domain |Glutaryl-CoA dehydrogenase GCDH |Human (Homo sapiens) [TaxId: 9606]
 d4iv6a2 :   (PHE231)  (GLU362)   [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.29