Tableau information
Concept source: d1cota_ amino acid (a.a.) range (ASP4)(SER119)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP4) (LYS16) H1
(LEU39) (ARG45) H2
(GLU57) (PRO67) H3
(THR72) (ASP82) H4
(LYS84) (MET90) H5
(ASN107) (SER119) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 115.6° H2
H3 -132.3° 34.9° H3
H4 39.3° 121.4° 155.7° H4
H5 -95.0° 33.3° 38.4° 121.7° H5
H6 -95.8° -95.4° -65.1° 129.5° -71.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hroa_ : (THR17) (GLU103) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Rhodopila globiformis [TaxId: 1071]
d1c2na_ : (ASP2) (VAL114) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Rhodobacter capsulatus [TaxId: 1061]
d1vyda_ : (LYS5) (LYS116) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Rhodobacter capsulatus [TaxId: 1061]
d1ql3a_ : (ASP3) (GLN100) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c552 |Paracoccus denitrificans [TaxId: 266]
d1cota_ : (ASP4) (SER119) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Paracoccus denitrificans [TaxId: 266]
d2bgvx_ : (ALA5) (SER119) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Paracoccus versutus [TaxId: 34007]
d1j3sa_ : (VAL3) (GLU104) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Mitochondrial cytochrome c |Human (Homo sapiens) [TaxId: 9606]
d2bh5x_ : (ASP4) (SER119) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Paracoccus versutus [TaxId: 34007]
d2c2ca_ : (ASP3) (LYS112) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |Cytochrome c2 |Rhodospirillum rubrum [TaxId: 1085]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.3