Protein Concepts Dictionary

Tableau information

Concept source:  d4hp5a1  amino acid (a.a.) range (VAL427)(ILE515)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL427)  (THR439) H1
	  (LYS443)  (THR454) H2
	  (ARG456)  (THR461) H3
	  (ASN483)  (GLU488) H4
	  (SER491)  (ASN497) H5
	  (SER500)  (ILE515) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      155.8°   H2                                 
H3     -143.1°  -53.6°   H3                          
H4      132.3°  -39.8°  -43.0°   H4                   
H5      123.8°  -33.7°  -72.1°   33.6°   H5            
H6      113.1°  -50.0° -102.6°  -82.0°  -52.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m53a2 :   (ILE427)  (HIS514)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Klebsiella sp., lx3 [TaxId: 576]
 d4mb1a1 :   (ASP387)  (GLN476)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus subtilis [TaxId: 224308]
 d2zica1 :   (ILE370)  (LYS456)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans
 d2zida1 :   (ILE370)  (LYS456)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Streptococcus mutans
 d4maza1 :   (ILE390)  (GLN476)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus subtilis [TaxId: 224308]
 d2pwfa1 :   (ILE385)  (THR473)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pseudomonas mesoacidophila [TaxId: 265293]
 d4m8ua1 :   (ILE390)  (GLN476)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus subtilis [TaxId: 224308]
 d3gbda1 :   (ILE400)  (ASP487)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Protaminobacter rubrum [TaxId: 126825]
 d2pwea1 :   (ILE385)  (THR473)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pseudomonas mesoacidophila [TaxId: 265293]
 d4hoza1 :   (VAL427)  (ASP514)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Erwinia rhapontici [TaxId: 55212]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1