Protein Concepts Dictionary

Tableau information

Concept source:  d3n1za_  amino acid (a.a.) range (PRO87)(SER232)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO87)  (ALA118) H1
	  (ALA120)  (TYR146) H2
	  (SER152)  (ALA158) H3
	  (GLU166)  (THR182) H4
	  (ASP184)  (GLY216) H5
	  (HIS218)  (SER232) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -152.5°   H2                                 
H3        9.8° -162.0°   H3                          
H4      -23.0° -162.3°  -15.3°   H4                   
H5     -153.1°   36.5° -150.3° -135.5°   H5            
H6       22.0° -170.4°   14.3°   22.0° -153.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rnfa_ :   (ILE100)  (GLY249)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rnba_ :    (PRO87)  (GLN236)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d1fzia_ :    (HIS96)  (GLU243)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylococcus capsulatus [TaxId: 414]
 d3dhia_ :    (PRO87)  (HIS234)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3dhgd_ :   (VAL102)  (SER232)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d4p1ba_ :   (ALA101)  (ASN248)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d1mhyd_ :    (PRO97)  (GLU243)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylosinus trichosporium [TaxId: 426]
 d3ri7a_ :   (VAL102)  (HIS234)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3dhga_ :    (PRO87)  (GLY216)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3ge3a_ :    (PRO87)  (HIS234)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
 d3rnga_ :    (PRO87)  (GLU231)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d2rdba_ :    (ASP86)  (SER232)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25