Protein Concepts Dictionary

Tableau information

Concept source:  d1yhma_  amino acid (a.a.) range (THR267)(ARG360)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR267)  (ALA272) H1
	  (SER275)  (LYS284) H2
	  (ASN286)  (ASN296) H3
	  (ASP301)  (ASN316) H4
	  (ASN316)  (LYS340) H5
	  (SER343)  (ARG360) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      -62.6°   H2                                 
H3      -90.1° -147.0°   H3                          
H4      107.0°   59.0° -153.4°   H4                   
H5      105.4°  112.9°  -91.2°   65.0°   H5            
H6      -82.5°  -76.8°   81.7° -120.0° -169.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1yhla_ :   (THR267)  (ARG360)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4e1ea_ :   (THR267)  (ARG360)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4dzwa_ :   (THR267)  (ARG360)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4jzba_ :   (THR267)  (THR357)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Leishmania major [TaxId: 5664]
 d4kk2a_ :   (THR253)  (LYS340)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Artemisia spiciformis [TaxId: 235357]
 d4k10d_ :   (THR267)  (THR357)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Leishmania major [TaxId: 5664]
 d1yhka_ :   (THR267)  (ARG360)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d2ewga_ :   (THR272)  (ARG365)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d1yhma_ :   (THR267)  (ARG360)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d2f94f_ :   (THR260)  (LEU336)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4kq5a_ :   (THR260)  (GLN331)   [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4k10b_ :   (THR267)  (TYR358)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Leishmania major [TaxId: 5664]
 d2o1oa_ :   (ASP267)  (ASN357)   [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Cryptosporidium parvum [TaxId: 5807]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.128