Protein Concepts Dictionary

Tableau information

Concept source:  d1n7qa1  amino acid (a.a.) range (THR437)(ASP532)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR437)  (ASP443) H1
	  (MET456)  (GLY461) H2
	  (GLY461)  (ARG466) H3
	  (GLU470)  (SER489) H4
	  (GLU492)  (ASP508) H5
	  (TYR520)  (ASP532) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      125.5°   H2                                 
H3      -58.1°  107.9°   H3                          
H4     -148.3°   86.0°  120.5°   H4                   
H5       24.9° -107.7°  -41.2° -159.3°   H5            
H6      -68.8°  158.4°  -93.4°   80.1°  -90.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1n7oa1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1c82a1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1loha1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7na1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7qa1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7ra1 :   (LYS432)  (SER531)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1n7pa1 :   (THR437)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1j0ma1 :   (TYR293)  (VAL364)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Xanthan lyase |Bacillus sp. GL1 [TaxId: 84635]
 d1rw9a1 :   (ASP266)  (ALA351)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Chondroitinase AC |Arthrobacter aurescens [TaxId: 43663]
 d1f9ga1 :   (ASP431)  (ASP532)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1lxka1 :   (THR437)  (SER531)   [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102