Protein Concepts Dictionary

Tableau information

Concept source:  d4d08a_  amino acid (a.a.) range (ASP683)(THR768)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP683)  (CYS695) H1
	  (ASN704)  (LYS712) H2
	  (SER713)  (TYR719) H3
	  (MET726)  (THR740) H4
	  (ASN744)  (PHE749) H5
	  (SER750)  (THR768) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       54.9°   H2                                 
H3     -143.6°  -92.7°   H3                          
H4      105.4°   92.2°   90.6°   H4                   
H5     -161.6° -106.8°  -24.3°  -70.7°   H5            
H6      -50.3°  -87.6° -120.8°  148.6°  139.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ecma_ :   (PRO583)  (THR668)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4kp6a_ :   (ILE273)  (THR345)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
 d1ro9a_ :   (ILE273)  (THR345)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
 d4c1ic_ :   (CYS695)  (ALA767)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3dysa_ :   (GLN279)  (THR363)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
 d4d08d1 :   (ASP683)  (THR768)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hd1a_ :   (CYS291)  (THR363)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
 d1ro6a_ :   (ILE273)  (ASP346)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
 d3v93f_ :   (PRO396)  (ASP481)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4jibd_ :   (ASP683)  (THR768)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3k3ea_ :   (GLN279)  (THR363)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
 d3d3pa_ :   (ASP261)  (THR345)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
 d4i15a_ :   (VAL708)  (THR783)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d4ddlb_ :   (LEU546)  (THR623)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uuoa_ :   (THR549)  (ALA632)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2chma1 :   (THR639)  (THR723)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.211