Protein Concepts Dictionary

Tableau information

Concept source:  d2jkvf2  amino acid (a.a.) range (ALA179)(LYS303)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA179)  (GLY210) H1
	  (ALA212)  (ASN224) H2
	  (SER230)  (LYS241) H3
	  (THR263)  (TYR274) H4
	  (LEU280)  (SER292) H5
	  (LYS294)  (LYS303) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      133.1°   H2                                 
H3      -44.1° -157.8°   H3                          
H4     -108.3°   56.7° -142.9°   H4                   
H5       63.4° -160.6°   24.3° -134.5°   H5            
H6      -31.4°  116.5°  -71.0°   77.2°  -82.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2zyaa2 :   (ALA178)  (LEU303)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2iyoa2 :   (GLY178)  (LEU305)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
 d2p4qa2 :   (ALA177)  (LEU302)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1pgna1 :   (ALA178)  (LYS302)   [view usage] : a.100.1.1 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain |6-phosphogluconate dehydrogenase (6PGD) |Sheep (Ovis orientalis aries) [TaxId: 9940]
 d2jkva2 :   (ALA179)  (LYS303)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pgja1 :   (GLY179)  (ALA305)   [view usage] : a.100.1.1 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain |6-phosphogluconate dehydrogenase (6PGD) |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2jkvf2 :   (ALA179)  (LYS303)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.100