Protein Concepts Dictionary

Tableau information

Concept source:  d3ejba_  amino acid (a.a.) range (THR22)(HIS95)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR22)   (GLN34) H1
	   (LYS38)   (THR43) H2
	   (SER47)   (GLY53) H3
	   (ASP55)   (ASP71) H4
	   (PRO75)   (LYS81) H5
	   (THR84)   (HIS95) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      115.6°   H2                                 
H3      -51.5°  139.9°   H3                          
H4      144.1°  -93.9°  116.7°   H4                   
H5      -86.0°   89.1°   55.2°  115.9°   H5            
H6      131.4°  -83.8° -134.9°  -27.5°  141.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ehta_ :     (SER1)   (LYS74)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |automated matches |Aquifex aeolicus [TaxId: 224324]
 d2l4ba_ :     (SER6)   (SER85)   [view usage] : a.28.1.0 |Acyl carrier protein-like |ACP-like |automated matches |automated matches |Anaplasma phagocytophilum [TaxId: 212042]
 d2dnwa_ :    (THR12)   (LYS89)   [view usage] : a.28.1.0 |Acyl carrier protein-like |ACP-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qnwa_ :     (ARG6)   (SER82)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Acyl carrier protein |Toxoplasma gondii [TaxId: 383379]
 d4ihfl_ :     (ILE3)   (GLY74)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |automated matches |Escherichia coli [TaxId: 885275]
 d4ihfi_ :     (THR2)   (ASN73)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |automated matches |Escherichia coli [TaxId: 885275]
 d3ejba_ :    (THR22)   (HIS95)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Acyl carrier protein |Escherichia coli [TaxId: 562]
 d4ihhj_ :     (THR2)   (GLY74)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |automated matches |Escherichia coli [TaxId: 885275]
 d2l0qa_ :     (LEU4)   (GLN80)   [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |automated matches |Vibrio harveyi [TaxId: 673519]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.28