Protein Concepts Dictionary

Tableau information

Concept source:  d4mjya_  amino acid (a.a.) range (HIS9)(LYS168)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS9)   (ARG39) H1
	   (HIS45)   (GLY73) H2
	   (LEU93)  (VAL121) H3
	  (PRO123)  (GLY155) H4
	  (GLY155)  (GLY160) H5
	  (GLY160)  (LYS168) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -163.4°   H2                                 
H3     -170.3°   14.2°   H3                          
H4       26.4° -168.1° -160.1°   H4                   
H5       33.3° -130.5°  143.1°   56.8°   H5            
H6     -115.4°   55.0°   55.0°  136.4°  -99.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mn9a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4dyya_ :    (HIS13)  (GLY176)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rgdb_ :    (SER11)  (VAL172)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4dz0a_ :    (GLN14)  (GLY176)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ka9a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3ka6a_ :     (HIS9)  (SER170)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d3rbct_ :     (HIS9)  (LYS168)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4lpna_ :     (HIS9)  (LYS172)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d4mjya_ :     (HIS9)  (LYS168)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Bullfrog (Rana catesbeiana) [TaxId: 8400]
 d2z6ma_ :    (ASP13)  (GLY176)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.25