Protein Concepts Dictionary

Tableau information

Concept source:  d3daia_  amino acid (a.a.) range (SER979)(LEU1093)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER979) (ASP1003) H1
	 (ARG1007) (PRO1012) H2
	 (ASP1020) (LYS1026) H3
	 (LEU1031) (HIS1041) H4
	 (VAL1046) (PRO1065) H5
	 (PRO1069) (LEU1093) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -124.0°   H2                                 
H3      133.1°  -91.4°   H3                          
H4     -168.2°  -57.8°  -55.4°   H4                   
H5      -28.8°  102.3°  125.1°  159.1°   H5            
H6      144.4°  -88.5°  -48.3°  -30.8° -167.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4lzra_ :    (THR60)  (LEU164)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ljwb_ :   (SER178)  (MET292)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nxbb_ :   (ASP438)  (LYS537)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2e7na_ :    (SER19)  (MET117)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rcwc_ :   (THR565)  (LEU675)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hmfa_ :   (SER178)  (ILE287)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3q2ea_ :  (TRP1318) (LYS1423)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qnsd_ :  (GLN1360) (ALA1459)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d3qzsb_ :    (THR70)  (ALA174)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uvda_ :  (PRO1456) (GLU1567)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4nxja_ :     (GLY1)  (LEU106)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d3rcwa_ :   (THR565)  (GLN658)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qy4a_ :  (PRO1381) (ILE1488)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ldfb_ :    (SER12)  (THR111)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d2data_ :    (PRO11)  (SER114)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1eqfa1 :  (SER1387) (LYS1484)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |TAFII250 double bromodomain module |Human (Homo sapiens) [TaxId: 9606]
 d2ouoa_ :   (LYS349)  (MET457)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qy4b_ :  (LEU1383) (LYS1490)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uv4a_ :  (ASP1523) (TYR1628)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ljwa_ :   (SER178)  (MET292)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qc1b_ :  (ASP2062) (LYS2166)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mb4a_ :   (THR624)  (GLU732)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qy4c_ :  (LEU1383) (GLN1486)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rcwd_ :   (LEU564)  (LEU675)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uv5a2 :  (ASP1523) (TYR1628)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yeka_ :    (THR76)  (MET180)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ldfa_ :    (SER12)  (THR111)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d4nqna_ :    (THR23)  (MET120)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4nr4b_ :  (LYS1086) (GLY1197)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2grca_ :  (PRO1456) (ASP1569)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mb3a_ :  (ASP1317) (PHE1431)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rcwh_ :   (PRO566)  (ILE673)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1eqfa2 :  (ASP1502) (TYR1607)   [view usage] : a.29.2.1 |Bromodomain-like |Bromodomain |Bromodomain |TAFII250 double bromodomain module |Human (Homo sapiens) [TaxId: 9606]
 d3rcwf_ :   (THR565)  (GLU676)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3uv5a1 :  (PRO1402) (LYS1505)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4a9oa_ :    (THR76)  (MET180)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4nxjb_ :     (GLY1)  (LEU106)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d3daia_ :   (SER979) (LEU1093)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rcwb_ :   (THR565)  (GLY680)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.29