Protein Concepts Dictionary

Tableau information

Concept source:  d4bg4a1  amino acid (a.a.) range (SER25)(TYR89)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER25)   (TYR30) H1
	   (THR32)   (LEU39) H2
	   (THR49)   (ILE54) H3
	   (ILE54)   (ASN60) H4
	   (ASP71)   (ALA79) H5
	   (ASP83)   (TYR89) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       90.6°   H2                                 
H3      132.7°  135.0°   H3                          
H4     -110.6° -134.0°   50.7°   H4                   
H5       38.1°  128.6°  -96.0°  -79.2°   H5            
H6      127.6° -132.9°   13.6°   63.2°  -94.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4bg4a1 :    (SER25)   (TYR89)   [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
 d3ju5a1 :    (SER23)   (ASN89)   [view usage] : a.83.1.1 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Arginine kinase, N-domain |Apostichopus japonicus [TaxId: 307972]
 d1vrpb1 :    (ASN28)   (ASP95)   [view usage] : a.83.1.1 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Creatine kinase, N-domain |Pacific electric ray (Torpedo californica) [TaxId: 7787]
 d2j1qa1 :    (SER25)   (TYR89)   [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d1qk1a1 :    (ASN23)   (ARG91)   [view usage] : a.83.1.1 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Creatine kinase, N-domain |Human (Homo sapiens), mitochondria [TaxId: 9606]
 d4am1a1 :    (SER25)   (TYR89)   [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
 d1crka1 :    (ASN23)   (ASN93)   [view usage] : a.83.1.1 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |Creatine kinase, N-domain |Chicken (Gallus gallus), mitochondria [TaxId: 9031]
 d4bg4b1 :    (SER25)   (TYR89)   [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
 d4bhla1 :    (SER25)   (TYR89)   [view usage] : a.83.1.0 |Guanido kinase N-terminal domain |Guanido kinase N-terminal domain |automated matches |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.83