Protein Concepts Dictionary

Tableau information

Concept source:  d3pefd2  amino acid (a.a.) range (GLY165)(GLU286)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY165)  (GLY196) H1
	  (ALA198)  (GLY209) H2
	  (PRO214)  (ARG226) H3
	  (PRO233)  (ARG250) H4
	  (VAL256)  (ALA271) H5
	  (ASP277)  (GLU286) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      136.8°   H2                                 
H3      -45.4° -177.6°   H3                          
H4     -119.7°   46.4° -134.6°   H4                   
H5       70.2° -146.2°   31.6° -150.0°   H5            
H6      -36.9°  128.6°  -53.6°  -89.5°   85.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pdug2 :   (GLY165)  (GLU286)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
 d2uyya2 :   (ASN432)  (ILE552)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3pefd2 :   (GLY165)  (GLU286)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 28232]
 d3pefa2 :   (GLY165)  (ARG287)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacter metallireducens [TaxId: 28232]
 d3ckyb2 :   (ALA169)  (THR293)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]
 d1wp4a1 :   (GLY159)  (GLY284)   [view usage] : a.100.1.1 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain |Hydroxyisobutyrate dehydrogenase |Thermus thermophilus [TaxId: 274]
 d4dlla2 :   (GLY193)  (ARG316)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
 d3pdua2 :   (GLY165)  (ALA287)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
 d3ckya2 :   (ALA169)  (THR293)   [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.100