Protein Concepts Dictionary

Tableau information

Concept source:  d1dohb_  amino acid (a.a.) range (THR213)(ASP278)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR213)  (VAL219) H1
	  (VAL219)  (PRO225) H2
	  (SER231)  (TRP243) H3
	  (PRO252)  (SER264) H4
	  (SER264)  (VAL270) H5
	  (GLY272)  (ASP278) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      -54.2°   H2                                 
H3      105.1°   52.9°   H3                          
H4      138.2°   96.0°   44.8°   H4                   
H5       63.1°   45.2°   55.3°  -75.1°   H5            
E6      -60.2°  -84.2° -124.2°  155.0°  119.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1yxma1 :   (VAL210)  (ASP262)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Peroxisomal trans 2-enoyl CoA reductase |Human (Homo sapiens) [TaxId: 9606]
 d3ndra_ :   (SER189)  (ASP242)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mesorhizobium loti [TaxId: 381]
 d3r3sa_ :   (ALA235)  (CYS288)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
 d1g0oc_ :   (THR213)  (ASP278)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) |Fungus (Magnaporthe grisea) [TaxId: 148305]
 d3nuga_ :   (SER189)  (ASP242)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mesorhizobium loti [TaxId: 381]
 d3ijrb_ :   (PRO229)  (ASN281)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d1dohb_ :   (THR213)  (ASP278)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) |Fungus (Magnaporthe grisea) [TaxId: 148305]
 d3ijra_ :   (PRO229)  (ASN281)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d1doha_ :   (THR213)  (ASP278)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) |Fungus (Magnaporthe grisea) [TaxId: 148305]
 d1ybva_ :   (THR213)  (ASP278)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) |Fungus (Magnaporthe grisea) [TaxId: 148305]
 d1g0oa_ :   (THR213)  (ASP278)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) |Fungus (Magnaporthe grisea) [TaxId: 148305]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2