Protein Concepts Dictionary

Tableau information

Concept source:  d4updb_  amino acid (a.a.) range (SER365)(PRO459)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER365)  (LEU376) H1
	  (THR382)  (THR392) H2
	  (GLY414)  (PHE427) H3
	  (LEU429)  (VAL441) H4
	  (VAL445)  (LEU451) E5
	  (SER453)  (PRO459) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      128.3°   H2                                 
H3      -38.7°  108.7°   H3                          
H4      -62.0°  103.2°  -25.6°   H4                   
E5      133.7°  -63.8°  164.2° -163.4°   E5            
H6      118.8°  -92.8°  156.1° -157.9°  -29.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4be4a_ :   (THR366)  (PHE458)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
 d1clea_ :   (THR354)  (LEU442)   [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Candida cylindracea, cholesterol esterase [TaxId: 44322]
 d4upda_ :   (SER365)  (PRO459)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
 d1gz7a_ :   (THR354)  (LEU442)   [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Candida rugosa, lipase 2 isoform [TaxId: 5481]
 d1mx1a_ :  (GLN1375) (ILE1465)   [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Mammalian carboxylesterase (liver carboxylesterase I) |Human (Homo sapiens) [TaxId: 9606]
 d4updb_ :   (SER365)  (PRO459)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
 d4be9a_ :   (SER365)  (PRO459)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
 d4be9b_ :   (SER365)  (PRO459)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Ophiostoma piceae [TaxId: 61273]
 d1ukcb_ :   (SER348)  (GLY435)   [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Esterase EstA |Aspergillus niger [TaxId: 5061]
 d1ukca_ :   (SER348)  (GLY435)   [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Esterase EstA |Aspergillus niger [TaxId: 5061]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69