Protein Concepts Dictionary

Tableau information

Concept source:  d1h0ha2  amino acid (a.a.) range (VAL321)(GLU409)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL321)  (ASP333) H1
	  (LEU334)  (ILE340) H2
	  (LYS345)  (PRO361) H3
	  (ASP362)  (MET371) E4
	  (GLN375)  (GLY394) H5
	  (VAL403)  (GLU409) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       58.4°   H2                                 
H3     -159.2°  121.7°   H3                          
E4       66.0°   26.9° -124.9°   E4                   
H5     -115.1° -144.9°  -51.0° -170.7°   H5            
E6       76.0°   18.6°  103.2°  -35.4° -135.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1r27a2 :   (THR472)  (VAL578)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Respiratory nitrate reductase 1 alpha chain |Escherichia coli [TaxId: 562]
 d3ml1a1 :   (PHE300)  (GLN384)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
 d1q16a2 :   (THR472)  (VAL578)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Respiratory nitrate reductase 1 alpha chain |Escherichia coli [TaxId: 562]
 d1aa6a2 :   (GLU253)  (GLY334)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase H |Escherichia coli [TaxId: 562]
 d3ir5a1 :   (THR472)  (VAL578)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3o5aa1 :   (THR299)  (GLN384)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Ralstonia eutropha [TaxId: 381666]
 d3egwa1 :   (THR472)  (VAL578)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1ogya2 :   (ASP299)  (GLN384)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Periplasmic nitrate reductase alpha chain |Rhodobacter sphaeroides [TaxId: 1063]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.81