Protein Concepts Dictionary

Tableau information

Concept source:  d1s6ba_  amino acid (a.a.) range (THR2)(GLY103)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR2)   (PRO14) H1
	   (TRP19)   (TYR25) H2
	   (ASP40)   (ARG56) H3
	   (TYR68)   (LYS73) E4
	   (THR76)   (SER82) E5
	   (SER85)  (GLY103) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      112.3°   H2                                 
H3      149.6°  -80.4°   H3                          
E4       15.8°  127.3°  145.4°   E4                   
E5      148.2°  -83.0°   -2.5°  143.1°   E5            
H6      -31.1°   96.8°  177.1°  -36.6° -179.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2h4ca_ :     (ASN1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Daboia russellii [TaxId: 343250]
 d4k09a_ :     (SER1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops brazili [TaxId: 157546]
 d1s6ba_ :     (THR2)  (GLY103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 2 [TaxId: 195058]
 d1t37a_ :     (ASN1)  (GLY103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 4 [TaxId: 195058]
 d1buna_ :     (LEU2)  (ASN103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Many-banded krait (Bungarus multicinctus), beta2-bungarotoxin [TaxId: 8616]
 d4e4ca_ :     (ASN1)  (LYS102)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Mainland tiger snake (Notechis scutatus scutatus), notexin [TaxId: 8663]
 d2h4cb_ :     (LEU2)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Daboia russellii [TaxId: 343250]
 d1bk9a_ :     (SER1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d3gcia_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 4 [TaxId: 195058]
 d1gp7a_ :     (HIS1)  (SER109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |King cobra (Ophiophagus hannah) [TaxId: 8665]
 d2pvta_ :     (SER1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Daboia russellii [TaxId: 97228]
 d1s6bb_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 3 [TaxId: 195058]
 d1mh2a_ :     (ASN1)  (GLY103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Andaman cobra (Naja sagittifera), isoform 2 [TaxId: 195058]
 d1m8ra_ :     (SER1)  (ASN109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d1mksa_ :     (LEU2)  (LYS108)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Cow (Bos taurus), pancreas [TaxId: 9913]
 d1ijla_ :     (SER1)   (ASN99)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Sharp-nosed viper (Deinagkistrodon acutus) [TaxId: 36307]
 d2h8ia_ :     (SER1)   (ASN99)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Jararacussu (Bothrops jararacussu) [TaxId: 8726]
 d1g2xa_ :     (ASN1)  (ALA104)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Indian krait (Bungarus caeruleus), different isoforms [TaxId: 132961]
 d1ae7a_ :     (LEU2)  (ALA109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Mainland tiger snake (Notechis scutatus scutatus), notexin [TaxId: 8663]
 d2osha_ :     (ASN1)  (ALA103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Chinese cobra (Naja atra) [TaxId: 8656]
 d1poaa_ :     (LEU2)  (ALA103)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Taiwan cobra (Naja naja atra) [TaxId: 8656]
 d2qogb_ :     (LEU2)  (SER109)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Crotalus durissus [TaxId: 8732]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.133