Protein Concepts Dictionary

Tableau information

Concept source:  d3awqa_  amino acid (a.a.) range (PRO229)(TRP326)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO229)  (GLN258) H1
	  (ILE263)  (GLN269) H2
	  (TYR273)  (ARG283) H3
	  (VAL291)  (GLN297) E4
	  (ARG310)  (LEU316) E5
	  (LEU316)  (TRP326) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -109.0°   H2                                 
H3      107.3° -143.1°   H3                          
E4     -124.8°   86.6°  -67.6°   E4                   
E5      -40.4°   74.7° -141.1°  142.6°   E5            
H6      -49.7°   84.4° -115.5°   81.7°  -64.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nz2a_ :   (GLU300)  (ASP397)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2c9 |Human (Homo sapiens) [TaxId: 9606]
 d3zbyb_ :   (SER243)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4gqsa_ :   (THR283)  (ASP397)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3awma_ :   (ILE263)  (TRP326)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
 d4egmb_ :   (ASP251)  (ASP329)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 316058]
 d2nzaa_ :   (GLY246)  (ASP327)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d1p2ya_ :   (CYS242)  (ASP328)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-CAM |Pseudomonas putida [TaxId: 303]
 d3zbya_ :   (SER243)  (ASP314)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d3vtja_ :   (PRO229)  (TRP326)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
 d3awqa_ :   (PRO229)  (TRP326)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Sphingomonas paucimobilis [TaxId: 13689]
 d3j6vg_ :   (LYS104)  (LYS194)   [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, mitochondrial (28S subunit) |Cow (Bos taurus) [TaxId: 9913]
 d4dnja_ :   (ASP254)  (ASP332)   [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 258594]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104,     i.1